RNA–Protein interactions for RNA: ENST00000551483.5

CNOT2-231, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2 BASIC

Gene CNOT2, Length 4,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-231	ENST00000551483	VPS16	Q9H269	839 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	TUFT1	Q9NNX1	390 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	DDX28	Q9NUL7	540 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	USP40	Q9NVE5	1235 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	GALNT8	Q9NY28	637 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	SH3GLB1	Q9Y371	365 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	PCDHGA3	Q9Y5H0	932 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	HTR3E	A5X5Y0	456 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	AREL1	O15033	823 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	DDX3Y	O15523	660 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CYP27B1	O15528	508 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCNT1	O60563	726 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	ALOX5	P09917	674 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	APEH	P13798	732 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	HSD3B1	P14060	373 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	RFC4	P35249	363 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	AMPH	P49418	695 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	INHBC	P55103	352 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	SSRP1	Q08945	709 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	HABP2	Q14520	560 aa	Predicted RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	INSC	Q1MX18	579 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CYB5D1	Q6P9G0	228 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	ZNF852	Q6ZMS4	543 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	RNF180	Q86T96	592 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CDH26	Q8IXH8	852 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	FAM178B	Q8IXR5	827 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	TRPC4AP	Q8TEL6	797 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CDCA5	Q96FF9	252 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	PPP1R36	Q96LQ0	422 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	CCDC43	Q96MW1	224 aa	Known RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	SIN3A	Q96ST3	1273 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	PRKD2	Q9BZL6	878 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	XKR8	Q9H6D3	395 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	HESX1	Q9UBX0	185 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	MBD1	Q9UIS9	605 aa	Predicted RBP	4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	NUDC	Q9Y266	331 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	PCDHGA2	Q9Y5H1	932 aa		4.15	□□□□□ -1.74
CNOT2-231	ENST00000551483	MAP3K19	Q56UN5	1328 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MAPKAPK2	P49137	400 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	CLCN4	P51793	760 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	CORO7	P57737	925 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	PHEX	P78562	749 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	TRAP1	Q12931	704 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	PPFIA1	Q13136	1202 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	DMC1	Q14565	340 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZMYM1	Q5SVZ6	1142 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	IFIT1B	Q5T764	474 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	OLFML2B	Q68BL8	750 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	RFX8	Q6ZV50	586 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	KRT74	Q7RTS7	529 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	PHC2	Q8IXK0	858 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	GRK7	Q8WTQ7	553 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	LMBR1	Q8WVP7	490 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	DACT3	Q96B18	629 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	RRP36	Q96EU6	259 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	VCPIP1	Q96JH7	1222 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	TCF25	Q9BQ70	676 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	TXLNGY	Q9BZA5	131 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	TRPV4	Q9HBA0	871 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MRPL39	Q9NYK5	338 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	BAIAP2L1	Q9UHR4	511 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	KDR	P35968	1356 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ATAD2	Q6PL18	1390 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	E2F8	A0AVK6	867 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	SCAMP1	O15126	338 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MAF	O75444	373 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ABLIM3	O94929	683 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MYCL	P12524	364 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	HDC	P19113	662 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MPST	P25325	297 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	EIF4A3	P38919	411 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	GRK6	P43250	576 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	MAPRE2	Q15555	327 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ZNF423	Q2M1K9	1284 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	C5orf22	Q49AR2	442 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	SPECC1L	Q69YQ0	1117 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	PCSK9	Q8NBP7	692 aa	Known RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	PIK3C3	Q8NEB9	887 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	SYN2	Q92777	582 aa	Predicted RBP	4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	SLC2A13	Q96QE2	648 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	EYA3	Q99504	573 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	CARD6	Q9BX69	1037 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	DCTPP1	Q9H773	170 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	GORASP2	Q9H8Y8	452 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	ARFGAP3	Q9NP61	516 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	VPS28	Q9UK41	221 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	EXOC6B	Q9Y2D4	811 aa		4.15	□□□□□ -1.75
CNOT2-231	ENST00000551483	TMEM94	Q12767	1356 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	ATP8B3	O60423	1300 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	MINDY4B	A8MYZ0	360 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	SMIM24	O75264	130 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	ALDH1A2	O94788	518 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	SLITRK5	O94991	958 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	AXL	P30530	894 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	L1CAM	P32004	1257 aa		4.14	□□□□□ -1.75
CNOT2-231	ENST00000551483	GBP1	P32455	592 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms