RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PACSIN2Q9UNF0 486 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-208ENST00000551338 STXBP5LQ9Y2K9 1186 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 TRIP11Q15643 1979 aa12.43□□□□□ -0.42
RAB5C-208ENST00000551338 CNTNAP2Q9UHC6 1331 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 TMCO5BA8MYB1 307 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ABLIM1O14639 778 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 HBP1O60381 514 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 MSCO60682 206 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 SASH3O75995 380 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 HLA-DRAP01903 254 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 NOP2P46087 812 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ACOT2P49753 483 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 SLC26A2P50443 739 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 MFAP3P55082 362 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 LAMTOR4Q0VGL1 99 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ZACNQ401N2 412 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 SPRYD7Q5W111 196 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 WDR93Q6P2C0 686 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ZPBP2Q6X784 338 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ZNF467Q7Z7K2 595 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 RPUSD2Q8IZ73 545 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ELMO3Q96BJ8 720 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 MSTO1Q9BUK6 570 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 GOLPH3Q9H4A6 298 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 SMARCAD1Q9H4L7 1026 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 PDE11AQ9HCR9 933 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-208ENST00000551338 ANKFY1Q9P2R3 1169 aa12.42□□□□□ -0.42
RAB5C-208ENST00000551338 TARSL2A2RTX5 802 aaKnown RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 CYP26A1O43174 497 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ATP8B1O43520 1251 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 FAM189A1O60320 539 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 VNN1O95497 513 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 GH1P01241 217 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 LGALS2P05162 132 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 PRKCBP05771 671 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 USP8P40818 1118 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 FMO1Q01740 532 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 GCNT1Q02742 428 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 PRPF4BQ13523 1007 aaKnown RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 LONRF2Q1L5Z9 754 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ZBTB8OSQ8IWT0 167 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 EXOC8Q8IYI6 725 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 PI4K2AQ9BTU6 479 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 MRPL4Q9BYD3 311 aaKnown RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ISCUQ9H1K1 167 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 SUGCTQ9HAC7 445 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ABCB6Q9NP58 842 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 ARFGAP3Q9NP61 516 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 SEPT11Q9NVA2 429 aaKnown RBP12.41□□□□□ -0.42
RAB5C-208ENST00000551338 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
RAB5C-208ENST00000551338 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 CES2O00748 559 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 C22orf31O95567 290 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 SNAI1O95863 264 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 TUBBP07437 444 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 ABCB4P21439 1286 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 PIK3CAP42336 1068 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 PAFAH1B1P43034 410 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 MATR3P43243 847 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 PLA2G4AP47712 749 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 DNA2P51530 1060 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 CLCN3P51790 818 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 EFNA5P52803 228 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 HADHBP55084 474 aaKnown RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 CBX1P83916 185 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 LAMC2Q13753 1193 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 GRB14Q14449 540 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 TCEAL1Q15170 157 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 SEZ6Q53EL9 994 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-208ENST00000551338 CCDC181Q5TID7 509 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 ENOSF1Q7L5Y1 443 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 NT5DC3Q86UY8 548 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 LINC01465Q8N7H1 131 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.42
RAB5C-208ENST00000551338 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms