RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 PRPF4BQ13523 1007 aaKnown RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 SURF1Q15526 300 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 MEA1Q16626 185 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 EXOC3L4Q17RC7 722 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 ZNF568Q3ZCX4 644 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 ATF7IP2Q5U623 682 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 CBWD2Q8IUF1 395 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 C7orf31Q8N865 590 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 ZNF397Q8NF99 534 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 KIAA1524Q8TCG1 905 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 PARD3BQ8TEW8 1205 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 NLRP7Q8WX94 980 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 VTI1AQ96AJ9 217 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 SAAL1Q96ER3 474 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 BAG1Q99933 345 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 FDXACB1Q9BRP7 624 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 MSTO1Q9BUK6 570 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 TARS2Q9BW92 718 aaKnown RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 SEZ6LQ9BYH1 1024 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 INO80BQ9C086 356 aaPredicted RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 ADAMTS10Q9H324 1103 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 TMEM8AQ9HCN3 771 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 ANKFY1Q9P2R3 1169 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 COQ4Q9Y3A0 265 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 PTCH2Q9Y6C5 1203 aa8.38□□□□□ -1.07
EFCAB2-216ENST00000551317 TRIP11Q15643 1979 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 LRRIQ3A6PVS8 624 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TREHO43280 583 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TSPAN1O60635 241 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 ZC3H11AO75152 810 aaKnown RBP eCLIP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CAND2O75155 1236 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 ERLIN2O94905 339 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 ASGR1P07306 291 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 GJB1P08034 283 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 MCF2P10911 925 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 SKILP12757 684 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 DARSP14868 501 aaKnown RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 AXLP30530 894 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 KRT9P35527 623 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 KLK7P49862 253 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 AP3M2P53677 418 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 NLRP11P59045 1033 aaKnown RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 PTPN21Q16825 1174 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 DCAF4L1Q3SXM0 396 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CBWD6Q4V339 395 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 EPC2Q52LR7 807 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CBWD3Q5JTY5 395 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CBWD5Q5RIA9 395 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 C1orf220Q5T0J3 134 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 KRT39Q6A163 491 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 DPY19L2P1Q6NXN4 242 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TRIM65Q6PJ69 517 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CXCL17Q6UXB2 119 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CRELD2Q6UXH1 353 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 RUFY4Q6ZNE9 571 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 OR8K1Q8NGG5 319 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 BAP1Q92560 729 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 SYN2Q92777 582 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 ZBTB10Q96DT7 871 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 FAM81BQ96LP2 452 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 SCLT1Q96NL6 688 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CGRRF1Q99675 332 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 FAM213AQ9BRX8 229 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 GCOM2Q9BZD3 368 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 HAPLN2Q9GZV7 340 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CDT1Q9H211 546 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 MINDY3Q9H8M7 445 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 FAM207AQ9NSI2 230 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 RBAKQ9NYW8 714 aaPredicted RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 CPSF3Q9UKF6 684 aaKnown RBP8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 PYCARDQ9ULZ3 195 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 PLAGL2Q9UPG8 496 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 TRIM17Q9Y577 477 aa8.37□□□□□ -1.07
EFCAB2-216ENST00000551317 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 GOLGA8IPA6NC78 632 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 GOLGA8JA6NMD2 632 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 EPHB6O15197 1021 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 CCP110O43303 1012 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 NOL4O94818 638 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 UCHL3P15374 230 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 ARF4P18085 180 aaPredicted RBP8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 PON1P27169 355 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 ANXA13P27216 316 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 ACLYP53396 1101 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 ADKP55263 362 aaKnown RBP8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 C1QTNF8P60827 252 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 PPP3CAQ08209 521 aa8.36□□□□□ -1.07
EFCAB2-216ENST00000551317 SNX17Q15036 470 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms