RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 TCP11X2Q5H9J9 407 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 DCAF17Q5H9S7 520 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 MFSD5Q6N075 450 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 CRELD2Q6UXH1 353 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 TMEM174Q8WUU8 243 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 DPF3Q92784 378 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 CCDC51Q96ER9 411 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 MKNK1Q9BUB5 465 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 NXF3Q9H4D5 531 aaKnown RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 KIAA1586Q9HCI6 787 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 TAB2Q9NYJ8 693 aa11.2□□□□□ -0.62
RAB5C-207ENST00000550504 RBAKQ9NYW8 714 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 ARMCX3Q9UH62 379 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 CPSF3Q9UKF6 684 aaKnown RBP11.2□□□□□ -0.62
RAB5C-207ENST00000550504 SERPINC1P01008 464 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CXCL10P02778 98 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CLTAP09496 248 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 TRIM49P0CI25 452 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 TRIM49CP0CI26 452 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CXCL8P10145 99 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 AKAP5P24588 427 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 EEF1GP26641 437 aaKnown RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 RFC2P35250 354 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 GRM5P41594 1212 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 WNT7BP56706 349 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 FANCCQ00597 558 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CYP24A1Q07973 514 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 KRT31Q15323 416 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 HABP4Q5JVS0 413 aaKnown RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 TCERG1LQ5VWI1 586 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 FRMD5Q7Z6J6 570 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 TMEM199Q8N511 208 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 RNF169Q8NCN4 708 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 RPF1Q9H9Y2 349 aaKnown RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 METTL14Q9HCE5 456 aaKnown RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 FAM105AQ9NUU6 356 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 SNTG2Q9NY99 539 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 ZMYND8Q9ULU4 1186 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-207ENST00000550504 IPPQ9Y573 584 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 PCDHB2Q9Y5E7 798 aa11.19□□□□□ -0.62
RAB5C-207ENST00000550504 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 MAPK13O15264 365 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 AP5Z1O43299 807 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 ACRP10323 421 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 DLATP10515 647 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 ITGA4P13612 1032 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 VAMP7P51809 220 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 COPB1P53618 953 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 DLG4P78352 724 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 BFSP1Q12934 665 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 ENOX2Q16206 610 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 KYAT1Q16773 422 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 UVSSAQ2YD98 709 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 BRSK2Q8IWQ3 736 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 TRIM59Q8IWR1 403 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 PLEKHO2Q8TD55 490 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 APBB2Q92870 758 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 BADQ92934 168 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 LPPQ93052 612 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 MFSD14AQ96MC6 490 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 ACAP3Q96P50 834 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 FTHL17Q9BXU8 183 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 VPS16Q9H269 839 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 KLK14Q9P0G3 267 aa11.18□□□□□ -0.62
RAB5C-207ENST00000550504 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
RAB5C-207ENST00000550504 TET1Q8NFU7 2136 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 LRRIQ3A6PVS8 624 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 LACTBL1A8MY62 500 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 C9IYK1 514 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 ENPP3O14638 875 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 MEFVO15553 781 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 RECQL4O94761 1208 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 TPM2P07951 284 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 RAB27AP51159 221 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 YARSP54577 528 aaKnown RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 MARSP56192 900 aaKnown RBP11.17□□□□□ -0.62
RAB5C-207ENST00000550504 FPGSQ05932 587 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 PSMD6Q15008 389 aa11.17□□□□□ -0.62
RAB5C-207ENST00000550504 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms