RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	OR1G1	P47890	313 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ME1	P48163	572 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	YARS	P54577	528 aa	Known RBP	13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SHC4	Q6S5L8	630 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	DYM	Q7RTS9	669 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	FAM178B	Q8IXR5	827 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	VPS52	Q8N1B4	723 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PDILT	Q8N807	584 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	BICD1	Q96G01	975 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PANK2	Q9BZ23	570 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ZBP1	Q9H171	429 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	CUEDC2	Q9H467	287 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	ANKFY1	Q9P2R3	1169 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	SEL1L	Q9UBV2	794 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	TBX20	Q9UMR3	447 aa		13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.09	□□□□□ -0.31
ARFGAP1-223	ENST00000550188	GOLGA6L4	A6NEF3	574 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MYMK	A6NI61	221 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HIDE1	A8MVS5	230 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188		H3BQ06	376 aa	Predicted RBP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PTGES	O14684	152 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	LINC01565	O15544	149 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	TH	P07101	528 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	SRGAP2B	P0DMP2	458 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	CTSA	P10619	480 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	BMP1	P13497	986 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	GAP43	P17677	238 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	CA8	P35219	290 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	NDUFV1	P49821	464 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ADAM15	Q13444	863 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	DUSP6	Q16828	381 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PUS10	Q3MIT2	529 aa	Known RBP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ZBTB33	Q86T24	672 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MRPL43	Q8N983	215 aa	Known RBP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ADAMTS19	Q8TE59	1207 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	FIZ1	Q96SL8	496 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	COLEC11	Q9BWP8	271 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MARCH5	Q9NX47	278 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	FAM13B	Q9NYF5	915 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PCDHA7	Q9UN72	937 aa		13.08	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	C2orf71	A6NGG8	1288 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	DLL1	O00548	723 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HNRNPDL	O14979	420 aa	Known RBP	13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PER2	O15055	1255 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	CLDN3	O15551	220 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	TBX10	O75333	385 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	CXCL14	O95715	111 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PIGR	P01833	764 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HARS	P12081	509 aa	Known RBP	13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	LTBR	P36941	435 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	LIG4	P49917	911 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MCL1	Q07820	350 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	TUSC3	Q13454	348 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	E2F4	Q16254	413 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	SFR1	Q86XK3	245 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MAP4K3	Q8IVH8	894 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	CEP120	Q8N960	986 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	IQUB	Q8NA54	791 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	DNAJC19	Q96DA6	116 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	VN1R3	Q9BXE9	311 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	LRRC27	Q9C0I9	530 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	TNMD	Q9H2S6	317 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ST6GALNAC4	Q9H4F1	302 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	IRAK3	Q9Y616	596 aa		13.07	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	GLP2R	O95838	553 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	SOD2	P04179	222 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	IDE	P14735	1019 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PTMS	P20962	102 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	NMT1	P30419	496 aa	Known RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MATR3	P43243	847 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	OSTN	P61366	133 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	GTF2B	Q00403	316 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	AMPD3	Q01432	767 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	DLX2	Q07687	328 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PTPN14	Q15678	1187 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	NAB2	Q15742	525 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	KYAT1	Q16773	422 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	RESP18	Q5W5W9	173 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	TMEM87A	Q8NBN3	555 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	LEO1	Q8WVC0	666 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	AUTS2	Q8WXX7	1259 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	DHX58	Q96C10	678 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HVCN1	Q96D96	273 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ZBTB45	Q96K62	511 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	SNX27	Q96L92	541 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ACAP3	Q96P50	834 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	UHRF1	Q96T88	793 aa	Predicted RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	PYM1	Q9BRP8	204 aa	Known RBP	13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	HERC2P3	Q9BVR0	1158 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	MAGEF1	Q9HAY2	307 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	KBTBD4	Q9NVX7	518 aa		13.06	□□□□□ -0.32
ARFGAP1-223	ENST00000550188	ADAM28	Q9UKQ2	775 aa		13.06	□□□□□ -0.32

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