RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 RNF169Q8NCN4 708 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 URGCPQ8TCY9 931 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 GAD1Q99259 594 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 NRDE2Q9H7Z3 1164 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 MIOSQ9NXC5 875 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 HCSTQ9UBK5 93 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 STXBP5LQ9Y2K9 1186 aa13.03□□□□□ -0.32
PFDN5-208ENST00000549995 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
PFDN5-208ENST00000549995 GOLGA6L4A6NEF3 574 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 OGTO15294 1046 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 CLDN3O15551 220 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 GADD45BO75293 160 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 KCNE1P15382 129 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 LIG1P18858 919 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 GARTP22102 1010 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 AKAP5P24588 427 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 ADSSP30520 456 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 CTNNB1P35222 781 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 LIG4P49917 911 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 KCNA1Q09470 495 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 STXBP4Q6ZWJ1 553 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 COLGALT2Q8IYK4 626 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 GLIS3Q8NEA6 775 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 CCDC34Q96HJ3 373 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 SNX27Q96L92 541 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 CPSF3Q9UKF6 684 aaKnown RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 EXOC7Q9UPT5 735 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-208ENST00000549995 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 REV3LO60673 3130 aa13.02□□□□□ -0.33
PFDN5-208ENST00000549995 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
PFDN5-208ENST00000549995 TGFB1I1O43294 461 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 NR1I2O75469 434 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 DDHD2O94830 711 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 ITGB1P05556 798 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 GALTP07902 379 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 SCNN1GP51170 649 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 GPM6BQ13491 265 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 CAMK1Q14012 370 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 POSTNQ15063 836 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 SPPL3Q8TCT6 385 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 GDPD5Q8WTR4 605 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 MRPL38Q96DV4 380 aaKnown RBP13.01□□□□□ -0.33
PFDN5-208ENST00000549995 BICD1Q96G01 975 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-208ENST00000549995 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 TOPORSQ9NS56 1045 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-208ENST00000549995 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
PFDN5-208ENST00000549995 ANKFY1Q9P2R3 1169 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 STK39Q9UEW8 545 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
PFDN5-208ENST00000549995 PRRC2BQ5JSZ5 2229 aaKnown RBP13□□□□□ -0.33
PFDN5-208ENST00000549995 VWA8A3KMH1 1905 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TSC2P49815 1807 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TISP43B9A030 160 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 FSCN2O14926 492 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 PRPF6O94906 941 aaKnown RBP13□□□□□ -0.33
PFDN5-208ENST00000549995 RPN1P04843 607 aaKnown RBP13□□□□□ -0.33
PFDN5-208ENST00000549995 CLTAP09496 248 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 BCAR1P56945 870 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 STK4Q13043 487 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TUSC3Q13454 348 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 COL19A1Q14993 1142 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 CRELD2Q6UXH1 353 aaPredicted RBP13□□□□□ -0.33
PFDN5-208ENST00000549995 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 FBXL18Q96ME1 805 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 FAM161BQ96MY7 647 aa13□□□□□ -0.33
PFDN5-208ENST00000549995 ACAP3Q96P50 834 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms