RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 CCL16O15467 120 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 CCNT1O60563 726 aaKnown RBP23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 C1RP00736 705 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 GRIK3Q13003 919 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 UBXN2BQ14CS0 331 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 NEK8Q86SG6 692 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 TPH2Q8IWU9 490 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 ITFG1Q8TB96 612 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 CLSTN3Q9BQT9 956 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 GJB4Q9NTQ9 266 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 POLIQ9UNA4 740 aa23.27■■□□□ 1.32
SLC38A1-207ENST00000549633 CEP250Q9BV73 2442 aa23.27■■□□□ 1.31
SLC38A1-207ENST00000549633 VWA8A3KMH1 1905 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CCDC194A0A1B0GVG4 234 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CPLX1O14810 134 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 ADAM12O43184 909 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 SPIRE1Q08AE8 756 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 NCBP1Q09161 790 aaKnown RBP23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 MXD4Q14582 209 aaPredicted RBP23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 MLF2Q15773 248 aaPredicted RBP23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CEP57Q86XR8 500 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 IFNLR1Q8IU57 520 aaPredicted RBP23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 FGF13Q92913 245 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 SHDQ96IW2 340 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CNTNAP3BQ96NU0 1288 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 KXD1Q9BQD3 176 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 DDX23Q9BUQ8 820 aaKnown RBP23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CNTNAP3Q9BZ76 1288 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 CXCL16Q9H2A7 254 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 ZSWIM4Q9H7M6 989 aa23.26■■□□□ 1.31
SLC38A1-207ENST00000549633 NOTCH4Q99466 2003 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 A0A087WWV3 80 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 CASTOR2A6NHX0 329 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 LAMTOR5O43504 91 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 MARCH6O60337 910 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 C8AP07357 584 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 GLRA2P23416 452 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 PSMA5P28066 241 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 CSTF1Q05048 431 aaKnown RBP23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 TFDP1Q14186 410 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 HSP90AA2PQ14568 343 aaPredicted RBP23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 SLC44A4Q53GD3 710 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 EARS2Q5JPH6 523 aaKnown RBP23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 PPM1LQ5SGD2 360 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 PPP4R3AQ6IN85 833 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 GALNT17Q6IS24 598 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 GPR65Q8IYL9 337 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 OXER1Q8TDS5 423 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 BCO2Q9BYV7 579 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 HCFC1R1Q9NWW0 138 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 NCDNQ9UBB6 729 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 ZFP37Q9Y6Q3 630 aaPredicted RBP23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 NCOR2Q9Y618 2525 aa23.25■■□□□ 1.31
SLC38A1-207ENST00000549633 FAM205CA6NFA0 338 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 FAM170BA6NMN3 283 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 KRT37O76014 449 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 SLITRK3O94933 977 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 KIF4AO95239 1232 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 CREMQ03060 361 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 PCBP1Q15365 356 aaKnown RBP eCLIP23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 PSMD5Q16401 504 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 VARS2Q5ST30 1063 aaKnown RBP23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 LIN9Q5TKA1 542 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 FAM171A1Q5VUB5 890 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 SLC27A1Q6PCB7 646 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 PIK3AP1Q6ZUJ8 805 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 RUFY3Q7L099 469 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 HACE1Q8IYU2 909 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 LNX1Q8TBB1 728 aaPredicted RBP23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 PHF20Q9BVI0 1012 aa23.24■■□□□ 1.31
SLC38A1-207ENST00000549633 SF3B1O75533 1304 aaKnown RBP eCLIP23.24■■□□□ 1.314e-6■■■■■ 93.6
SLC38A1-207ENST00000549633 GCFC2P16383 781 aaKnown RBP23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 ARL2P36404 184 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 TSSK4Q6SA08 328 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 ING5Q8WYH8 240 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 PIK3R5Q8WYR1 880 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 TTPALQ9BTX7 342 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 LTB4R2Q9NPC1 389 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 GPR179Q6PRD1 2367 aa23.23■■□□□ 1.31
SLC38A1-207ENST00000549633 TBX3O15119 743 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 HNRNPA1P09651 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 POU5F1BQ06416 359 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 ZNF528Q3MIS6 628 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 MTSS1LQ765P7 747 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 SLC7A14Q8TBB6 771 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 EIF2AK1Q9BQI3 630 aaKnown RBP23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 POLR3FQ9H1D9 316 aaPredicted RBP23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 FBXO4Q9UKT5 387 aa23.22■■□□□ 1.31
SLC38A1-207ENST00000549633 A0A1B0GUA9 196 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 TTLL13PA6NNM8 815 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 PTGESO14684 152 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 IGFBP6P24592 240 aaPredicted RBP23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 PRKCQQ04759 706 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 TUSC3Q13454 348 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 MAEAQ7L5Y9 396 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 ZNF274Q96GC6 653 aaPredicted RBP23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 ZSWIM6Q9HCJ5 1215 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 GPRC5CQ9NQ84 441 aa23.21■■□□□ 1.31
SLC38A1-207ENST00000549633 SPTLC1O15269 473 aa23.2■■□□□ 1.3
SLC38A1-207ENST00000549633 TARSP26639 723 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms