RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 UPP2O95045 317 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 GJB5O95377 273 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 LDHAP00338 332 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 NR3C1P04150 777 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 CLTAP09496 248 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 ATP2A2P16615 1042 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 IBSPP21815 317 aaPredicted RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 AKAP5P24588 427 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 TNFSF9P41273 254 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 POU5F1Q01860 360 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 TYRO3Q06418 890 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 STX1AQ16623 288 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 CT47A1Q5JQC4 288 aaPredicted RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 CLLU1OSQ5K130 101 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 PRPF38BQ5VTL8 546 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 ANKRD40Q6AI12 368 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 TTI2Q6NXR4 508 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 HERC6Q8IVU3 1022 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 ZC3H3Q8IXZ2 948 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 SAAL1Q96ER3 474 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 APOL6Q9BWW8 343 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 RSAD1Q9HA92 442 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 RC3H2Q9HBD1 1191 aaKnown RBP22.99■■□□□ 1.27
CACNB3-210ENST00000548874 UBN1Q9NPG3 1134 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 DACH1Q9UI36 760 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 GIT1Q9Y2X7 761 aa22.99■■□□□ 1.27
CACNB3-210ENST00000548874 MEFVO15553 781 aaPredicted RBP22.98■■□□□ 1.27
CACNB3-210ENST00000548874 HOXA2O43364 376 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 FGFR1P11362 822 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 CYP2J2P51589 502 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 OSTNP61366 133 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 GPD1LQ8N335 351 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 XXYLT1Q8NBI6 393 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 ZNF689Q96CS4 500 aaPredicted RBP22.98■■□□□ 1.27
CACNB3-210ENST00000548874 ACAP3Q96P50 834 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 MED15Q96RN5 788 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 TSG101Q99816 390 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 RWDD2AQ9UIY3 292 aa22.98■■□□□ 1.27
CACNB3-210ENST00000548874 BICDL2A1A5D9 508 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 OFD1O75665 1012 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 ADRB2P07550 413 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 NR2F2P24468 414 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 ERCC5P28715 1186 aaPredicted RBP22.97■■□□□ 1.27
CACNB3-210ENST00000548874 ACOT2P49753 483 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 HTRA4P83105 476 aaPredicted RBP22.97■■□□□ 1.27
CACNB3-210ENST00000548874 XKR4Q5GH76 650 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 RSPH1Q8WYR4 309 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 SNX27Q96L92 541 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 DUSP9Q99956 384 aaKnown RBP22.97■■□□□ 1.27
CACNB3-210ENST00000548874 FAM213AQ9BRX8 229 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 TMEM117Q9H0C3 514 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 KIAA1586Q9HCI6 787 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 PARP2Q9UGN5 583 aa22.97■■□□□ 1.27
CACNB3-210ENST00000548874 GOLGA8IPA6NC78 632 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 GOLGA8JA6NMD2 632 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 RPL13P26373 211 aaKnown RBP22.96■■□□□ 1.27
CACNB3-210ENST00000548874 GATMP50440 423 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 ENOX2Q16206 610 aaKnown RBP22.96■■□□□ 1.27
CACNB3-210ENST00000548874 SLC10A6Q3KNW5 377 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 FAM109BQ6ICB4 259 aaPredicted RBP22.96■■□□□ 1.27
CACNB3-210ENST00000548874 FAM117BQ6P1L5 589 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 GLB1LQ6UWU2 654 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 ALKAL1Q6UXT8 129 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 LRRC55Q6ZSA7 311 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 GSTCDQ8NEC7 633 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 HELQQ8TDG4 1101 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 CASD1Q96PB1 797 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 GAD1Q99259 594 aa22.96■■□□□ 1.27
CACNB3-210ENST00000548874 TOPORSQ9NS56 1045 aaPredicted RBP22.96■■□□□ 1.27
CACNB3-210ENST00000548874 A0A1W2PPC1 479 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 TTC26A0AVF1 554 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 ARL5CA6NH57 179 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 EXOC3O60645 756 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 CCDC192P0DO97 292 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 CXCL8P10145 99 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 MLH1P40692 756 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 YARSP54577 528 aaKnown RBP22.95■■□□□ 1.26
CACNB3-210ENST00000548874 STX17P56962 302 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 FKBP3Q00688 224 aaKnown RBP22.95■■□□□ 1.26
CACNB3-210ENST00000548874 HSP90AA2PQ14568 343 aaPredicted RBP22.95■■□□□ 1.26
CACNB3-210ENST00000548874 C11orf57Q6ZUT1 292 aaPredicted RBP22.95■■□□□ 1.26
CACNB3-210ENST00000548874 CBWD2Q8IUF1 395 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 BRSK2Q8IWQ3 736 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 ZFP42Q96MM3 310 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 CXCL16Q9H2A7 254 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 RPF1Q9H9Y2 349 aaKnown RBP22.95■■□□□ 1.26
CACNB3-210ENST00000548874 PLEKHA5Q9HAU0 1116 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 KLK14Q9P0G3 267 aa22.95■■□□□ 1.26
CACNB3-210ENST00000548874 RALGAPA2Q2PPJ7 1873 aa22.94■■□□□ 1.26
CACNB3-210ENST00000548874 CASP4P49662 377 aa22.94■■□□□ 1.26
CACNB3-210ENST00000548874 AFF1P51825 1210 aaKnown RBP22.94■■□□□ 1.26
CACNB3-210ENST00000548874 ADAM9Q13443 819 aa22.94■■□□□ 1.26
CACNB3-210ENST00000548874 SNRNP35Q16560 246 aaKnown RBP22.94■■□□□ 1.26
CACNB3-210ENST00000548874 RAD9AQ99638 391 aa22.94■■□□□ 1.26
CACNB3-210ENST00000548874 CNTN3Q9P232 1028 aa22.94■■□□□ 1.26
CACNB3-210ENST00000548874 FNDC1Q4ZHG4 1894 aaPredicted RBP22.94■■□□□ 1.26
CACNB3-210ENST00000548874 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.93■■□□□ 1.26
CACNB3-210ENST00000548874 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.93■■□□□ 1.26
CACNB3-210ENST00000548874 ZNF233A6NK53 670 aa22.93■■□□□ 1.26
CACNB3-210ENST00000548874 GRXCR1A8MXD5 290 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms