RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CXCL16Q9H2A7 254 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 BHMT2Q9H2M3 363 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 ACKR2O00590 384 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 PAPLNO95428 1278 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 PTPN5P54829 565 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 TUSC3Q13454 348 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 HSP90AA2PQ14568 343 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 PPP2R5AQ15172 486 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 NAB2Q15742 525 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 OTOP3Q7RTS5 596 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 GPR65Q8IYL9 337 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 PRRX2Q99811 253 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 RHOBTB2Q9BYZ6 727 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 SNTG2Q9NY99 539 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 LRWD1Q9UFC0 647 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 LIMD1Q9UGP4 676 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHMP1A-205ENST00000548650 CASTOR2A6NHX0 329 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 N4BP1O75113 896 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 RFPL2O75678 378 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 KIF4AO95239 1232 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 LIG1P18858 919 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 AVPR2P30518 371 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 PTGDRQ13258 359 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 USP41Q3LFD5 358 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 RTP2Q5QGT7 225 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 SNX29Q8TEQ0 813 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 ZNF707Q96C28 371 aaPredicted RBP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 ACSF2Q96CM8 615 aaPredicted RBP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 DDX19AQ9NUU7 478 aaKnown RBP19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 FNIP2Q9P278 1114 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 KIAA1024Q9UPX6 916 aa19.19■□□□□ 0.66
CHMP1A-205ENST00000548650 C1RP00736 705 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 MYBP10242 640 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 TMEM132AQ24JP5 1023 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 ELMSAN1Q6PJG2 1045 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 HASPINQ8TF76 798 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 HDAC7Q8WUI4 952 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 KIFAP3Q92845 792 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 PHOX2BQ99453 314 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 ADPGKQ9BRR6 497 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 POLD4Q9HCU8 107 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 DPP7Q9UHL4 492 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 MYH11P35749 1972 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 CLUHO75153 1309 aa19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 PDCD11Q14690 1871 aaKnown RBP19.18■□□□□ 0.66
CHMP1A-205ENST00000548650 DOCK6Q96HP0 2047 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 CCDC195A0A1B0GUA6 201 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 PP2D1A8MPX8 630 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 TGM5O43548 720 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 RPL17P18621 184 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 EFNA5P52803 228 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 CREMQ03060 361 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 PDIA5Q14554 519 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 IL17AQ16552 155 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 DCAF4L1Q3SXM0 396 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 NT5DC1Q5TFE4 455 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 PRSS55Q6UWB4 352 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 CYP26C1Q6V0L0 522 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 PALB2Q86YC2 1186 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 GLYCTKQ8IVS8 523 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 DAW1Q8N136 415 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 IFT74Q96LB3 600 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 WDR6Q9NNW5 1121 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 PHLPP2Q6ZVD8 1323 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 CITO14578 2027 aa19.17■□□□□ 0.66
CHMP1A-205ENST00000548650 LAD1O00515 517 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 TADA2AO75478 443 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 THP07101 528 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 PRPHP41219 470 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 RABEP1Q15276 862 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 ATF7IP2Q5U623 682 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 LILRA6Q6PI73 481 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 PIK3R5Q8WYR1 880 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 SMG7Q92540 1137 aaKnown RBP19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 RAB34Q9BZG1 259 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 PLEKHA4Q9H4M7 779 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 STK24Q9Y6E0 443 aa19.16■□□□□ 0.66
CHMP1A-205ENST00000548650 E9PMD0 336 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 MAPK7Q13164 816 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 KCNK18Q7Z418 384 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 TMEM105Q8N8V8 129 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 MMTAG2Q9BU76 263 aaKnown RBP19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 KCNK12Q9HB15 430 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 ZDHHC7Q9NXF8 308 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 DUSP12Q9UNI6 340 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 GDAQ9Y2T3 454 aa19.15■□□□□ 0.66
CHMP1A-205ENST00000548650 CDC25AP30304 524 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 NPTX2P47972 431 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 TDGQ13569 410 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 GLRA4Q5JXX5 417 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 FAM171A1Q5VUB5 890 aa19.14■□□□□ 0.65
CHMP1A-205ENST00000548650 KRT79Q5XKE5 535 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms