RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
VPS29-205ENST00000548539 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS29-205ENST00000548539 NRG4Q8WWG1 115 aa5.32□□□□□ -1.56
VPS29-205ENST00000548539 COA7Q96BR5 231 aa5.32□□□□□ -1.56
VPS29-205ENST00000548539 DYDC2Q96IM9 177 aa5.32□□□□□ -1.56
VPS29-205ENST00000548539 AIFM3Q96NN9 605 aa5.32□□□□□ -1.56
VPS29-205ENST00000548539 FDXACB1Q9BRP7 624 aaPredicted RBP5.32□□□□□ -1.56
VPS29-205ENST00000548539 A0A0A6YYK5 440 aaPredicted RBP5.31□□□□□ -1.56
VPS29-205ENST00000548539 MAFGO15525 162 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 ARHGAP6O43182 974 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 AKAP5P24588 427 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 STAT5BP51692 787 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 KCNQ1P51787 676 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 SLC16A1P53985 500 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 COL10A1Q03692 680 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 FSTL1Q12841 308 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 MAP3K12Q12852 859 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 GRM3Q14832 879 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 LAIR1Q6GTX8 287 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 PPP4R4Q6NUP7 873 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 DGKHQ86XP1 1220 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 TMPRSS6Q8IU80 811 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 CCAR1Q8IX12 1150 aaKnown RBP5.31□□□□□ -1.56
VPS29-205ENST00000548539 RSAD2Q8WXG1 361 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 DPF2Q92785 391 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 SOX7Q9BT81 388 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 SLC12A5Q9H2X9 1139 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 POLR3BQ9NW08 1133 aaPredicted RBP5.31□□□□□ -1.56
VPS29-205ENST00000548539 RCAN3Q9UKA8 241 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 INTUQ9ULD6 942 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 LIMCH1Q9UPQ0 1083 aa5.31□□□□□ -1.56
VPS29-205ENST00000548539 CCDC154A6NI56 674 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 PEX14O75381 377 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 PEX11BO96011 259 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 POU2F2P09086 479 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 HNRNPLP14866 589 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS29-205ENST00000548539 PDCP20941 246 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 FBLP22087 321 aaKnown RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 ETV4P43268 484 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 MRPS21P82921 87 aaKnown RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 MALLQ13021 153 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 GRM7Q14831 915 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 C3orf36Q3SXR2 165 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 MUM1L1Q5H9M0 696 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 LMBR1LQ6UX01 489 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 B3GNT9Q6UX72 402 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 Q6ZPA2 131 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 CXXC5Q7LFL8 322 aaKnown RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 ADGRE4PQ86SQ3 457 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 BCL6BQ8N143 479 aaPredicted RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 GLB1L3Q8NCI6 653 aaPredicted RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 SLC35G2Q8TBE7 412 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 FATE1Q969F0 183 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 ADI1Q9BV57 179 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 SAE1Q9UBE0 346 aaPredicted RBP5.3□□□□□ -1.56
VPS29-205ENST00000548539 SYNPO2Q9UMS6 1093 aa5.3□□□□□ -1.56
VPS29-205ENST00000548539 FRMPD2Q68DX3 1309 aaPredicted RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 A0A0G2JNJ9 132 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 ERC2O15083 957 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 CYP27B1O15528 508 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 HTRA2O43464 458 aaPredicted RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 NRP2O60462 931 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 CTNND1O60716 968 aaKnown RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 MYL1P05976 194 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 GSPT1P15170 499 aaKnown RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 EDNRBP24530 442 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 GPR15P49685 360 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 NRG3P56975 720 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 CD69Q07108 199 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 NOMO1Q15155 1222 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 TBR1Q16650 682 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 ANO4Q32M45 955 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 TMEM200BQ69YZ2 307 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 CCSAPQ6IQ19 270 aaPredicted RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 BTNL9Q6UXG8 535 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 USP45Q70EL2 814 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 GLB1L2Q8IW92 636 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 D2HGDHQ8N465 521 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 PPP1R35Q8TAP8 253 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 HPS3Q969F9 1004 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 RUNDC1Q96C34 613 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 MAP3K14Q99558 947 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 ACO2Q99798 780 aaKnown RBP5.29□□□□□ -1.56
VPS29-205ENST00000548539 ARNT2Q9HBZ2 717 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 PRDM11Q9NQV5 511 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 Q9UFV3 132 aa5.29□□□□□ -1.56
VPS29-205ENST00000548539 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 CAPN14A8MX76 684 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 SEC24DO94855 1032 aaPredicted RBP5.28□□□□□ -1.56
VPS29-205ENST00000548539 HMGCRP04035 888 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 MCAMP43121 646 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 PPP3CAQ08209 521 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 CRHR2Q13324 411 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 IL10RAQ13651 578 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 ATAT1Q5SQI0 421 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 SYCP2LQ5T4T6 812 aa5.28□□□□□ -1.56
VPS29-205ENST00000548539 USP30Q70CQ3 517 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms