RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZDHHC7Q9NXF8 308 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 COL4A2P08572 1712 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 PCNX2A6NKB5 2137 aa15.7■□□□□ 0.1
PTCH1-217ENST00000548420 NFASCO94856 1347 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 IGLV3-22A0A075B6J6 115 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 FAM86B1E9PN63 330 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 TGM5O43548 720 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 EFEMP2O95967 443 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 FAM86B2P0C5J1 330 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 NLRP5P59047 1200 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 LILRA6Q6PI73 481 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 NECAB1Q8N987 351 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 HNRNPABQ99729 332 aaKnown RBP15.69■□□□□ 0.1
PTCH1-217ENST00000548420 PCDHA4Q9UN74 947 aa15.69■□□□□ 0.1
PTCH1-217ENST00000548420 USP9XQ93008 2570 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-217ENST00000548420 CFAP46Q8IYW2 2715 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 EIF4E1BA6NMX2 242 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 GAS2O43903 313 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 OFD1O75665 1012 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 C22orf31O95567 290 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 SOD2P04179 222 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 CHRNB1P11230 501 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 USP11P51784 963 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 AFF1P51825 1210 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 NOMO2Q5JPE7 1267 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 WDR44Q5JSH3 913 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 KBTBD6Q86V97 674 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 LOXL4Q96JB6 756 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 IER2Q9BTL4 223 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 PLEKHA4Q9H4M7 779 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 INPP5FQ9Y2H2 1132 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 ZNF462Q96JM2 2506 aa15.68■□□□□ 0.1
PTCH1-217ENST00000548420 ASCC3Q8N3C0 2202 aaKnown RBP15.68■□□□□ 0.1
PTCH1-217ENST00000548420 APC2O95996 2303 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ACACAQ13085 2346 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 DHX15O43143 795 aaKnown RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ZMYND10O75800 440 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 CEACAM1P13688 526 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 PLA2G2AP14555 144 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ACTR2P61160 394 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ST3GAL1Q11201 340 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ITGB3BPQ13352 177 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 BLIDQ8IZY5 108 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 TNPO1Q92973 898 aaKnown RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 EDEM2Q9BV94 578 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 HERC2P3Q9BVR0 1158 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 JPH1Q9HDC5 661 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 MARCH5Q9NX47 278 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 ORC3Q9UBD5 711 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-217ENST00000548420 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
PTCH1-217ENST00000548420 NRG2O14511 850 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-217ENST00000548420 HBP1O60381 514 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 PAPSS2O95340 614 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-217ENST00000548420 ATG7O95352 703 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 URODP06132 367 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 ATP4AP20648 1035 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 EIF4BP23588 611 aaKnown RBP15.66■□□□□ 0.1
PTCH1-217ENST00000548420 ZNF76P36508 570 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 MPLP40238 635 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 PHKA2P46019 1235 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 NLRP11P59045 1033 aaKnown RBP15.66■□□□□ 0.1
PTCH1-217ENST00000548420 C19orf57Q0VDD7 668 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 PLA2G4DQ86XP0 818 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 SPEM1Q8N4L4 309 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 HNRNPLLQ8WVV9 542 aaKnown RBP15.66■□□□□ 0.1
PTCH1-217ENST00000548420 LENG9Q96B70 501 aa15.66■□□□□ 0.1
PTCH1-217ENST00000548420 WDR81Q562E7 1941 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CYP3A7-CYP3A51PA0A087WV96 503 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 NRP1O14786 923 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 DTNBO60941 627 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CSRP1P21291 193 aaKnown RBP15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CYP3A7P24462 503 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CLCN3P51790 818 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 RNASELQ05823 741 aaKnown RBP15.65■□□□□ 0.1
PTCH1-217ENST00000548420 ELMSAN1Q6PJG2 1045 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 WDR5BQ86VZ2 330 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 NPAS3Q8IXF0 933 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 B3GALT6Q96L58 329 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 RBM12Q9NTZ6 932 aaKnown RBP15.65■□□□□ 0.1
PTCH1-217ENST00000548420 KCNJ14Q9UNX9 436 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 EML5Q05BV3 1969 aa15.65■□□□□ 0.1
PTCH1-217ENST00000548420 CARNS1A5YM72 827 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 F8W810 466 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 IPO5O00410 1097 aaKnown RBP15.64■□□□□ 0.09
PTCH1-217ENST00000548420 MAN2B1O00754 1011 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 SETQ01105 290 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-217ENST00000548420 TANGO2Q6ICL3 276 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 Q6ZS52 159 aa15.64■□□□□ 0.09
PTCH1-217ENST00000548420 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms