RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 MCM6Q14566 821 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 BMS1Q14692 1282 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 SMAD2Q15796 467 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 CLUL1Q15846 466 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 SPECC1Q5M775 1068 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 TMEM161BQ8NDZ6 487 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 AUTS2Q8WXX7 1259 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 LARP4BQ92615 738 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 RAD54LQ92698 747 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 KCNN1Q92952 543 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 RPS6KC1Q96S38 1066 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 ACO2Q99798 780 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 REEP2Q9BRK0 252 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 TARS2Q9BW92 718 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 MRPL4Q9BYD3 311 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 CXCL16Q9H2A7 254 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 PTPRHQ9HD43 1115 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 CD320Q9NPF0 282 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 LARSQ9P2J5 1176 aaKnown RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 STK39Q9UEW8 545 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 ODF2LQ9ULJ1 636 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 PRG3Q9Y2Y8 225 aaPredicted RBP8.7□□□□□ -1.02
PRIM1-203ENST00000548173 MYH11P35749 1972 aa8.7□□□□□ -1.02
PRIM1-203ENST00000548173 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 F8W810 466 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 ABLIM1O14639 778 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 LILRB3O75022 631 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 CLASP2O75122 1294 aaKnown RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 NR1I2O75469 434 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 BRD1O95696 1058 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 SOD2P04179 222 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 MAPTP10636 758 aaKnown RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 PROZP22891 400 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 ZNF131P52739 623 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 SMTNP53814 917 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 NCKAP1LP55160 1127 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 DHX8Q14562 1220 aaKnown RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 PTPN14Q15678 1187 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 NAB2Q15742 525 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 ZNF568Q3ZCX4 644 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 GJD3Q8N144 294 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 CEP120Q8N960 986 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 RASSF8Q8NHQ8 419 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 CLIC6Q96NY7 704 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 COLEC11Q9BWP8 271 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 CDT1Q9H211 546 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 GDAQ9Y2T3 454 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 HCFC2Q9Y5Z7 792 aa8.69□□□□□ -1.02
PRIM1-203ENST00000548173 SPTBN5Q9NRC6 3674 aaKnown RBP8.69□□□□□ -1.02
PRIM1-203ENST00000548173 TOM1L1O75674 476 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 FAM13AO94988 1023 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 THP07101 528 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 SRGAP2BP0DMP2 458 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 MCF2P10911 925 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 HOXB8P17481 243 aaPredicted RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 CA8P35219 290 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 GRM5P41594 1212 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 NUBP1P53384 320 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ZP2Q05996 745 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 STRN3Q13033 797 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 TUSC3Q13454 348 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 XKR4Q5GH76 650 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ANKRD54Q6NXT1 300 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 LLGL2Q6P1M3 1020 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 SYCE2Q6PIF2 218 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 MPZL3Q6UWV2 235 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ALKAL1Q6UXT8 129 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ZPBP2Q6X784 338 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 TAS1R1Q7RTX1 841 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 HAUS6Q7Z4H7 955 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 APBB1IPQ7Z5R6 666 aaPredicted RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ADHFE1Q8IWW8 467 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 SLC22A17Q8WUG5 538 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 SUSD6Q92537 303 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 RABGGTAQ92696 567 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 CASP10Q92851 521 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ZBTB45Q96K62 511 aaPredicted RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ZNF396Q96N95 335 aaPredicted RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 FIZ1Q96SL8 496 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 PAAF1Q9BRP4 392 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 TCHPQ9BT92 498 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 HERC2P3Q9BVR0 1158 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 GPR62Q9BZJ7 368 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 S1PR5Q9H228 398 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 PARVGQ9HBI0 331 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 CHST7Q9NS84 486 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 TFIP11Q9UBB9 837 aaKnown RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 CACNG4Q9UBN1 327 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 CCDC39Q9UFE4 941 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 ADAM28Q9UKQ2 775 aa8.68□□□□□ -1.02
PRIM1-203ENST00000548173 USP15Q9Y4E8 981 aaPredicted RBP8.68□□□□□ -1.02
PRIM1-203ENST00000548173 A0A087X0B3 334 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms