RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 C17orf80Q9BSJ5 609 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TRAIPQ9BWF2 469 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 LACRTQ9GZZ8 138 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DHX36Q9H2U1 1008 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 CWH43Q9H720 699 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 MMRN2Q9H8L6 949 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 VTA1Q9NP79 307 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DDX4Q9NQI0 724 aaKnown RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 VPS45Q9NRW7 570 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 SEMA4GQ9NTN9 838 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 EBF1Q9UH73 591 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ST6GALNAC2Q9UJ37 374 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ACSL6Q9UKU0 697 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ZNF214Q9UL59 606 aaPredicted RBP0.46□□□□□ -2.34
CEP290-203ENST00000547691 PLAGL2Q9UPG8 496 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 AP4E1Q9UPM8 1137 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 MAN2B2Q9Y2E5 1009 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 COG6Q9Y2V7 657 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 TESMINQ9Y4I5 508 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 NUB1Q9Y5A7 615 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 MCM3APO60318 1980 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 ABCB11O95342 1321 aa0.46□□□□□ -2.34
CEP290-203ENST00000547691 DDTLA6NHG4 134 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 KIF28PB7ZC32 967 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CIAO1O76071 339 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ITGB3P05106 788 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CD46P15529 392 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CYP2B6P20813 491 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 IGFBP4P22692 258 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 RPL10P27635 214 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 CYP2C18P33260 490 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 RFX5P48382 616 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 POLGP54098 1239 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 DEFB103AP81534 67 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PLAURQ03405 335 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CFHR1Q03591 330 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 C1QL3Q5VWW1 255 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 KIAA0825Q8IV33 1275 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TMEM255BQ8WV15 326 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ARNTL2Q8WYA1 636 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PLD4Q96BZ4 506 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 MED8Q96G25 268 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PHACTR3Q96KR7 559 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 DUSP9Q99956 384 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 OCSTAMPQ9BR26 566 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 B3GNT4Q9C0J1 378 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SPATC1LQ9H0A9 340 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TRPV6Q9H1D0 765 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 GREM2Q9H772 168 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CARS2Q9HA77 564 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PRDM7Q9NQW5 492 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 IL17BQ9UHF5 180 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TRMT112Q9UI30 125 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 GPR160Q9UJ42 338 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 AKAP2Q9Y2D5 859 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TSC22D4Q9Y3Q8 395 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 DSPP15924 2871 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 CHD5Q8TDI0 1954 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 KANSL1LA0AUZ9 987 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CAPN9O14815 690 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZNF862O60290 1169 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 B4GALT3O60512 393 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CLASP2O75122 1294 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 ECI2O75521 394 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 DDAH2O95865 285 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ITGB1P05556 798 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SRGAP2BP0DMP2 458 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 VCAM1P19320 739 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 NFKB1P19838 968 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 HOXA9P31269 272 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SELENOPP49908 381 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ATP2B2Q01814 1243 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TEFQ10587 303 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SFSWAPQ12872 951 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 LAMB3Q13751 1172 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PRKG1Q13976 671 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SMAD1Q15797 465 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 DUSP28Q4G0W2 176 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TPRNQ4KMQ1 711 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 STPG1Q5TH74 334 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 LRRC8DQ7L1W4 858 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 RPAP2Q8IXW5 612 aaPredicted RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 ARMC10Q8N2F6 343 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 SAMD3Q8N6K7 520 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 TDRD5Q8NAT2 981 aaKnown RBP0.45□□□□□ -2.34
CEP290-203ENST00000547691 PIGOQ8TEQ8 1089 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.45□□□□□ -2.34
CEP290-203ENST00000547691 GAB3Q8WWW8 586 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 LINC01599Q8WXQ3 324 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 KAT2BQ92831 832 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 PMEPA1Q969W9 287 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 HIC2Q96JB3 615 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 C1QTNF3Q9BXJ4 246 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 CARD11Q9BXL7 1154 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ZBP1Q9H171 429 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 ABHD16BQ9H3Z7 469 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 POMKQ9H5K3 350 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 VEZTQ9HBM0 779 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 RXFP1Q9HBX9 757 aa0.45□□□□□ -2.34
CEP290-203ENST00000547691 LTB4R2Q9NPC1 389 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms