RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 TCEAL5Q5H9L2 206 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 PDE12Q6L8Q7 609 aaKnown RBP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 ZNF720Q7Z2F6 126 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 CEP120Q8N960 986 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 STAMQ92783 540 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 HVCN1Q96D96 273 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 TMEM169Q96HH4 297 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 IGSF21Q96ID5 467 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 ZBTB45Q96K62 511 aaPredicted RBP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 STRA6Q9BX79 667 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 TRIM9Q9C026 710 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 GBP3Q9H0R5 595 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 OLFML3Q9NRN5 406 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 THEGQ9P2T0 379 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 PUF60Q9UHX1 559 aaKnown RBP11.24□□□□□ -0.61
LINC02409-201ENST00000547515 KCNH3Q9ULD8 1083 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 GDAQ9Y2T3 454 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 SCN1AP35498 2009 aa11.24□□□□□ -0.61
LINC02409-201ENST00000547515 A0A1W2PQ27 194 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 A0A1W2PQ64 194 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 A0A1W2PQD8 194 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 PTGESO14684 152 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 ALDH2P05091 517 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 IDEP14735 1019 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 PFKFB1P16118 471 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 LIG4P49917 911 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 SKIV2LQ15477 1246 aaKnown RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 NAB2Q15742 525 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 ZC2HC1CQ53FD0 456 aaPredicted RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 HERC4Q5GLZ8 1057 aaPredicted RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 BCL7CQ8WUZ0 217 aaPredicted RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 BICD1Q96G01 975 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 C7orf25Q9BPX7 421 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 HAPLN2Q9GZV7 340 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 CXCL16Q9H2A7 254 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 MRPL44Q9H9J2 332 aaKnown RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 ANKFY1Q9P2R3 1169 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
LINC02409-201ENST00000547515 COG5Q9UP83 839 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 HPSEQ9Y251 543 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
LINC02409-201ENST00000547515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 A0A1B0GVL5 298 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 NRP1O14786 923 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 CLDN3O15551 220 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 NCK2O43639 380 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 CSPG5O95196 566 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 EFEMP2O95967 443 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 THP07101 528 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 SLFN14P0C7P3 912 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 YARSP54577 528 aaKnown RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 COASYQ13057 564 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 TUSC3Q13454 348 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ALCAMQ13740 583 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ADGRD2Q7Z7M1 963 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ATXN2LQ8WWM7 1075 aaKnown RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 HLA-CQ95604 372 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 SNX27Q96L92 541 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 ACAP3Q96P50 834 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 TCF25Q9BQ70 676 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 NGRNQ9NPE2 291 aaKnown RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 TOPORSQ9NS56 1045 aaPredicted RBP11.22□□□□□ -0.61
LINC02409-201ENST00000547515 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 PCDHGC5Q9Y5F6 944 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 STYXL1Q9Y6J8 313 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 UNC80Q8N2C7 3258 aa11.22□□□□□ -0.61
LINC02409-201ENST00000547515 DOCK6Q96HP0 2047 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 A0A0B4J269 797 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 MEFVO15553 781 aaPredicted RBP11.21□□□□□ -0.61
LINC02409-201ENST00000547515 FAM189A1O60320 539 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 NR1I2O75469 434 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 HARSP12081 509 aaKnown RBP11.21□□□□□ -0.61
LINC02409-201ENST00000547515 KCNE1P15382 129 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 OR1G1P47890 313 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 CASP5P51878 434 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 OSTNP61366 133 aa11.21□□□□□ -0.61
LINC02409-201ENST00000547515 ASIC1P78348 528 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms