RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	DMRT3	Q9NQL9	472 aa		5.96	□□□□□ -1.46
LGR5-204	ENST00000547310	NCDN	Q9UBB6	729 aa		5.96	□□□□□ -1.46
LGR5-204	ENST00000547310	TUBD1	Q9UJT1	453 aa		5.96	□□□□□ -1.46
LGR5-204	ENST00000547310	ACRV1	P26436	265 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	SREBF1	P36956	1147 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	RECQL	P46063	649 aa	Predicted RBP	5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	RGS19	P49795	217 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	NEK2	P51955	445 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	INHBC	P55103	352 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ADK	P55263	362 aa	Known RBP	5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	APBA1	Q02410	837 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ELAVL1	Q15717	326 aa	Known RBP	5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	GPRIN1	Q7Z2K8	1008 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	SGMS1	Q86VZ5	419 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ST8SIA2	Q92186	375 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ZNF503	Q96F45	646 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	SLC2A13	Q96QE2	648 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.95	□□□□□ -1.46
LGR5-204	ENST00000547310	CLCA2	Q9UQC9	943 aa		5.95	□□□□□ -1.46
LGR5-204	ENST00000547310		A0A087X1B8	175 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	CAPN14	A8MX76	684 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310		B5MCH6	92 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	PJA2	O43164	708 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	STC2	O76061	302 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	GNAT2	P19087	354 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	HIBADH	P31937	336 aa	Known RBP	5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	GUCY1A2	P33402	732 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	SLC6A9	P48067	706 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	FLT3LG	P49771	235 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	RABGGTB	P53611	331 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	SLC16A1	P53985	500 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	ODF1	Q14990	250 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	SEPT2	Q15019	361 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	FAM47A	Q5JRC9	791 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	EFCAB2	Q5VUJ9	269 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	DPY19L2P1	Q6NXN4	242 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	FAM83A	Q86UY5	434 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	TRMT2A	Q8IZ69	625 aa	Known RBP	5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	OR52N2	Q8NGI0	321 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	CASKIN2	Q8WXE0	1202 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	CRAMP1	Q96RY5	1269 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	FAM30A	Q9NZY2	134 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	SAP30BP	Q9UHR5	308 aa	Known RBP	5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	GIT1	Q9Y2X7	761 aa		5.94	□□□□□ -1.46
LGR5-204	ENST00000547310	ATRNL1	Q5VV63	1379 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	XPOT	O43592	962 aa	Known RBP	5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	ALDH1L1	O75891	902 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	CCND1	P24385	295 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	ADSL	P30566	484 aa	Predicted RBP	5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	SP140	Q13342	867 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	ACAP2	Q15057	778 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	NOMO1	Q15155	1222 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	PRAMEF14	Q5SWL7	426 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	C1QL3	Q5VWW1	255 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	IGFL4	Q6B9Z1	124 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	PNMA8A	Q86V59	439 aa	Predicted RBP	5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	GSPT2	Q8IYD1	628 aa	Known RBP	5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	ANKRD13A	Q8IZ07	590 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	OR2I1P	Q8NGU4	316 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	NRG4	Q8WWG1	115 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	COA7	Q96BR5	231 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	LSM14B	Q9BX40	385 aa	Known RBP	5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	KCNH6	Q9H252	994 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	LANCL2	Q9NS86	450 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	SIK3	Q9Y2K2	1263 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	IPP	Q9Y573	584 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	ZMYM3	Q14202	1370 aa		5.93	□□□□□ -1.46
LGR5-204	ENST00000547310	KLRG2	A4D1S0	409 aa	Predicted RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	NARS	O43776	548 aa	Known RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	ZRANB2	O95218	330 aa	Known RBP eCLIP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	IL2RB	P14784	551 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	ALOX15	P16050	662 aa	Predicted RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	MCM7	P33993	719 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	BMT2	Q1RMZ1	405 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	FAM214A	Q32MH5	1076 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	ZBTB46	Q86UZ6	589 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	CMTR2	Q8IYT2	770 aa	Known RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	PQLC1	Q8N2U9	271 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	CPA6	Q8N4T0	437 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	MDM1	Q8TC05	714 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	ZG16B	Q96DA0	208 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	CEP95	Q96GE4	821 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	CAMKK2	Q96RR4	588 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	SMAD5	Q99717	465 aa	Known RBP	5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	MANSC1	Q9H8J5	431 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	XDH	P47989	1333 aa		5.92	□□□□□ -1.46
LGR5-204	ENST00000547310	E2F8	A0AVK6	867 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	TBKBP1	A7MCY6	615 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	GOLGA6L6	A8MZA4	724 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	PLSCR1	O15162	318 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	ADCY6	O43306	1168 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	SGTA	O43765	313 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	ZNF202	O95125	648 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	SNUPN	O95149	360 aa	Known RBP	5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	HSP90B1	P14625	803 aa	Known RBP	5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	EDNRB	P24530	442 aa		5.91	□□□□□ -1.46
LGR5-204	ENST00000547310	MAN2A2	P49641	1150 aa		5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms