RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 PPME1Q9Y570 386 aa17.83■□□□□ 0.44
BRF1-208ENST00000546997 PTCH2Q9Y6C5 1203 aa17.83■□□□□ 0.44
BRF1-208ENST00000546997 IGKV6-21A0A0C4DH24 114 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 CCDC169A6NNP5 214 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 C22orf31O95567 290 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 MYL3P08590 195 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 GLRA2P23416 452 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 NCKAP1LP55160 1127 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 ARHGEF6Q15052 776 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 KNOP1Q1ED39 458 aaKnown RBP17.82■□□□□ 0.44
BRF1-208ENST00000546997 KIAA0753Q2KHM9 967 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 HAUS6Q7Z4H7 955 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 ZC3H3Q8IXZ2 948 aaKnown RBP17.82■□□□□ 0.44
BRF1-208ENST00000546997 C17orf75Q9HAS0 396 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 ANKRD65E5RJM6 399 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 ADAMTS4O75173 837 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 INHAP05111 366 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 MAPTP10636 758 aaKnown RBP17.82■□□□□ 0.44
BRF1-208ENST00000546997 EPHB4P54760 987 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 GNGT1P63211 74 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 PURAQ00577 322 aaKnown RBP17.82■□□□□ 0.44
BRF1-208ENST00000546997 TMEM161BQ8NDZ6 487 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 UPF3AQ9H1J1 476 aaKnown RBP17.82■□□□□ 0.44
BRF1-208ENST00000546997 PLEKHA4Q9H4M7 779 aa17.82■□□□□ 0.44
BRF1-208ENST00000546997 CLGNO14967 610 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 IPO7O95373 1038 aaKnown RBP17.81■□□□□ 0.44
BRF1-208ENST00000546997 GNA14O95837 355 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 MARSP56192 900 aaKnown RBP17.81■□□□□ 0.44
BRF1-208ENST00000546997 EDRF1Q3B7T1 1238 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 BRDTQ58F21 947 aaPredicted RBP17.81■□□□□ 0.44
BRF1-208ENST00000546997 ZNF484Q5JVG2 852 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 GNASQ5JWF2 1037 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 SLAIN1Q8ND83 568 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 SPIRE2Q8WWL2 714 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 NTPCRQ9BSD7 190 aaKnown RBP17.81■□□□□ 0.44
BRF1-208ENST00000546997 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 KMT5AQ9NQR1 393 aa17.81■□□□□ 0.44
BRF1-208ENST00000546997 KIAA0754O94854 1291 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 GJB1P08034 283 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 GRK4P32298 578 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 FNTAP49354 379 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 CLCN3P51790 818 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 SMTNP53814 917 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 GTF2BQ00403 316 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 MFSD10Q14728 455 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 GRIK4Q16099 956 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 CCDC40Q4G0X9 1142 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
BRF1-208ENST00000546997 MARCH8Q5T0T0 291 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 PRPF31Q8WWY3 499 aaKnown RBP17.8■□□□□ 0.44
BRF1-208ENST00000546997 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
BRF1-208ENST00000546997 ST6GALNAC4Q9H4F1 302 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
BRF1-208ENST00000546997 TRAF3IP3Q9Y228 551 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 CEP83Q9Y592 693 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 PCDHB13Q9Y5F0 798 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 UBE4BO95155 1302 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 COL1A2P08123 1366 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 HAS3O00219 553 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 MEFVO15553 781 aaPredicted RBP17.8■□□□□ 0.44
BRF1-208ENST00000546997 TGFB1I1O43294 461 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 ZMYND10O75800 440 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 SMIM10L2AP0DMW4 78 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 SMIM10L2BP0DMW5 78 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 KLRC1P26715 233 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 PRMT2P55345 433 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 ADAM9Q13443 819 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 CCDC155Q8N6L0 562 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 LMBR1Q8WVP7 490 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 IFT74Q96LB3 600 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 SETD4Q9NVD3 440 aa17.8■□□□□ 0.44
BRF1-208ENST00000546997 DENND3A2RUS2 1198 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 PSEN2P49810 448 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 CAPSQ13938 189 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 HIC1Q14526 733 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 EFCAB12Q6NXP0 572 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TRIM59Q8IWR1 403 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TRIM58Q8NG06 486 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 SH3TC2Q8TF17 1288 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TYW1Q9NV66 732 aaKnown RBP17.79■□□□□ 0.44
BRF1-208ENST00000546997 ARHGAP28Q9P2N2 729 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 HDAC6Q9UBN7 1215 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 DDX20Q9UHI6 824 aaKnown RBP17.79■□□□□ 0.44
BRF1-208ENST00000546997 LRRIQ4A6NIV6 560 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TMCO5BA8MYB1 307 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TISP43B9A030 160 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 PDXKO00764 312 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
BRF1-208ENST00000546997 MYBL2P10244 700 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 NKX3-2P78367 333 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 IER5Q5VY09 327 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 CXCL17Q6UXB2 119 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 TAS1R3Q7RTX0 852 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 OTUD6BQ8N6M0 293 aa17.79■□□□□ 0.44
BRF1-208ENST00000546997 LINC01465Q8N7H1 131 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms