RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PROZP22891 400 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 DLX2Q07687 328 aaPredicted RBP17.44■□□□□ 0.38
DDX54-204ENST00000546898 MPZL3Q6UWV2 235 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 ZPBP2Q6X784 338 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 MRPL43Q8N983 215 aaKnown RBP17.44■□□□□ 0.38
DDX54-204ENST00000546898 CCDC94Q9BW85 323 aaPredicted RBP17.44■□□□□ 0.38
DDX54-204ENST00000546898 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
DDX54-204ENST00000546898 MARCH5Q9NX47 278 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 CD207Q9UJ71 328 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
DDX54-204ENST00000546898 PTGESO14684 152 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 PER2O15055 1255 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 TOM1L1O75674 476 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 BRD1O95696 1058 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 THP07101 528 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 GRM5P41594 1212 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 TUSC3Q13454 348 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 SMAD4Q13485 552 aaKnown RBP17.43■□□□□ 0.38
DDX54-204ENST00000546898 KCNC3Q14003 757 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
DDX54-204ENST00000546898 TMEM184AQ6ZMB5 413 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 HAUS6Q7Z4H7 955 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 MYCT1Q8N699 235 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
DDX54-204ENST00000546898 MSLNLQ96KJ4 702 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 HERC2P3Q9BVR0 1158 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 COLEC11Q9BWP8 271 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 VN1R3Q9BXE9 311 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 TOPORSQ9NS56 1045 aaPredicted RBP17.43■□□□□ 0.38
DDX54-204ENST00000546898 CLEC1BQ9P126 229 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
DDX54-204ENST00000546898 GDAQ9Y2T3 454 aa17.43■□□□□ 0.38
DDX54-204ENST00000546898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.42■□□□□ 0.38
DDX54-204ENST00000546898 K7ENM7 598 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 TNFRSF10AO00220 468 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 ABLIM1O14639 778 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 TRAK2O60296 914 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 CUTAO60888 179 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 CXCL14O95715 111 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 SOD2P04179 222 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 IL9P15248 144 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 CA8P35219 290 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 STAT6P42226 847 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 YARSP54577 528 aaKnown RBP17.42■□□□□ 0.38
DDX54-204ENST00000546898 COASYQ13057 564 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 PKP1Q13835 747 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 PTPN14Q15678 1187 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 SV2BQ7L1I2 683 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 RNF168Q8IYW5 571 aaPredicted RBP17.42■□□□□ 0.38
DDX54-204ENST00000546898 KCNG4Q8TDN1 519 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 TCHPQ9BT92 498 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 BARX2Q9UMQ3 279 aaPredicted RBP17.42■□□□□ 0.38
DDX54-204ENST00000546898 SSX2IPQ9Y2D8 614 aa17.42■□□□□ 0.38
DDX54-204ENST00000546898 MBTPS2O43462 519 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 EFEMP2O95967 443 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX54-204ENST00000546898 NAB2Q15742 525 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 FAM178BQ8IXR5 827 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 CEP120Q8N960 986 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 SMRP1Q8NCR6 262 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 VN1R2Q8NFZ6 395 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 CASP10Q92851 521 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 ANKFY1Q9P2R3 1169 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 SEL1LQ9UBV2 794 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 PRKAG3Q9UGI9 489 aa17.41■□□□□ 0.38
DDX54-204ENST00000546898 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
DDX54-204ENST00000546898 PIGRP01833 764 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 URODP06132 367 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 MCL1Q07820 350 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 HSP90AA2PQ14568 343 aaPredicted RBP17.4■□□□□ 0.38
DDX54-204ENST00000546898 SMAD2Q15796 467 aaKnown RBP17.4■□□□□ 0.38
DDX54-204ENST00000546898 CLUL1Q15846 466 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 FUT10Q6P4F1 479 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 ZBTB33Q86T24 672 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 AUTS2Q8WXX7 1259 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 DDX12PQ92771 950 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 BICD1Q96G01 975 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 NECAB3Q96P71 396 aaPredicted RBP17.4■□□□□ 0.38
DDX54-204ENST00000546898 FIZ1Q96SL8 496 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 CUEDC2Q9H467 287 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 ST6GALNAC4Q9H4F1 302 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 MRPL17Q9NRX2 175 aaKnown RBP17.4■□□□□ 0.38
DDX54-204ENST00000546898 ADAM28Q9UKQ2 775 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 TBX20Q9UMR3 447 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 HCFC2Q9Y5Z7 792 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 TCHHQ07283 1943 aa17.4■□□□□ 0.38
DDX54-204ENST00000546898 VWA8A3KMH1 1905 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
DDX54-204ENST00000546898 A0A087X0B3 334 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 HNRNPDLO14979 420 aaKnown RBP17.39■□□□□ 0.37
DDX54-204ENST00000546898 CLDN3O15551 220 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 HOXB8P17481 243 aaPredicted RBP17.39■□□□□ 0.37
DDX54-204ENST00000546898 GAP43P17677 238 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 GLUD2P49448 558 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 GTF2BQ00403 316 aa17.39■□□□□ 0.37
DDX54-204ENST00000546898 BECN1Q14457 450 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms