RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FGFBP2Q9BYJ0 223 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 PRDM12Q9H4Q4 367 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 PLEKHA5Q9HAU0 1116 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 MIOSQ9NXC5 875 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 FNDC1Q4ZHG4 1894 aaPredicted RBP15.82■□□□□ 0.12
DDX54-203ENST00000546869 EPOPA6NHQ4 379 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 ANKRD63C9JTQ0 380 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 KIAA0391O15091 583 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 OGTO15294 1046 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 LPXNO60711 386 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 RECQL4O94761 1208 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 CLTAP09496 248 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 PRR29P0C7W0 189 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 GARTP22102 1010 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 LAMA2P24043 3122 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 ADSSP30520 456 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 CTNNB1P35222 781 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 PPM1AP35813 382 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 ALDH7A1P49419 539 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 AFF1P51825 1210 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 UBE3AQ05086 875 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 GRIK3Q13003 919 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 STK4Q13043 487 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 CHD9Q3L8U1 2897 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 KCNT2Q6UVM3 1135 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 TMEM174Q8WUU8 243 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 SCFD1Q8WVM8 642 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 ZFP42Q96MM3 310 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 FAM161BQ96MY7 647 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 ZNF558Q96NG5 402 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 GSDMAQ96QA5 445 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 GAS2L1Q99501 681 aaPredicted RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 LMAN2LQ9H0V9 348 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 NRDE2Q9H7Z3 1164 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 CERS4Q9HA82 394 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 EXOC1Q9NV70 894 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
DDX54-203ENST00000546869 ANKFY1Q9P2R3 1169 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 PLAGL2Q9UPG8 496 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 LZTS1Q9Y250 596 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
DDX54-203ENST00000546869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 KINO60870 393 aaKnown RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 DDHD2O94830 711 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 POMCP01189 267 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 ALDH2P05091 517 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 THP07101 528 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 GALTP07902 379 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 KCNE1P15382 129 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 HOXD13P35453 343 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 SCNN1GP51170 649 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 GPM6BQ13491 265 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 SPOUT1Q5T280 376 aaKnown RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 ZNF280BQ86YH2 543 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 CD302Q8IX05 232 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 COLGALT2Q8IYK4 626 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 THNSL1Q8IYQ7 743 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 CEP120Q8N960 986 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 KLHL23Q8NBE8 558 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 GLIS3Q8NEA6 775 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 FAM193BQ96PV7 902 aaPredicted RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 RPS6KC1Q96S38 1066 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 MSTO1Q9BUK6 570 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 APOL6Q9BWW8 343 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 SLC39A2Q9NP94 309 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 CNTN3Q9P232 1028 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 STK39Q9UEW8 545 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 CPSF3Q9UKF6 684 aaKnown RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 MTUS1Q9ULD2 1270 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 GDAQ9Y2T3 454 aa15.8■□□□□ 0.12
DDX54-203ENST00000546869 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.8■□□□□ 0.12
DDX54-203ENST00000546869 PTGESO14684 152 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 KIF20AO95235 890 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 SMC2O95347 1197 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 MATR3P43243 847 aaKnown RBP eCLIP15.79■□□□□ 0.12
DDX54-203ENST00000546869 BCAR1P56945 870 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 NAB2Q15742 525 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 KNOP1Q1ED39 458 aaKnown RBP15.79■□□□□ 0.12
DDX54-203ENST00000546869 SLC10A6Q3KNW5 377 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 SLC39A11Q8N1S5 342 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 SPPL3Q8TCT6 385 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 SNX27Q96L92 541 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 PPP1R10Q96QC0 940 aaKnown RBP15.79■□□□□ 0.12
DDX54-203ENST00000546869 LMBRD1Q9NUN5 540 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 KLK14Q9P0G3 267 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 HCSTQ9UBK5 93 aa15.79■□□□□ 0.12
DDX54-203ENST00000546869 AGO2Q9UKV8 859 aaKnown RBP15.79■□□□□ 0.12
DDX54-203ENST00000546869 RALGAPA2Q2PPJ7 1873 aa15.78■□□□□ 0.12
DDX54-203ENST00000546869 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms