RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
CCDC38-203ENST00000546803 KCNA1Q09470 495 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 KCNB1Q14721 858 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 SLC39A4Q6P5W5 647 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 THNSL1Q8IYQ7 743 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 ZNF507Q8TCN5 953 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 ZNF558Q96NG5 402 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
CCDC38-203ENST00000546803 KLK14Q9P0G3 267 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 EPOPA6NHQ4 379 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 ANKRD63C9JTQ0 380 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 RHOBTB3O94955 611 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 CLTAP09496 248 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 PPM1AP35813 382 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 ALDH7A1P49419 539 aaKnown RBP18.36■□□□□ 0.53
CCDC38-203ENST00000546803 SCNN1GP51170 649 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 AFF1P51825 1210 aaKnown RBP18.36■□□□□ 0.53
CCDC38-203ENST00000546803 GRIK3Q13003 919 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 GPM6BQ13491 265 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 BMT2Q1RMZ1 405 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 KCNT2Q6UVM3 1135 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 CEP120Q8N960 986 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 GLIS3Q8NEA6 775 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 GSTCDQ8NEC7 633 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 TMEM175Q9BSA9 504 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 MSTO1Q9BUK6 570 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 HAPLN2Q9GZV7 340 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 NRDE2Q9H7Z3 1164 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 SLC39A2Q9NP94 309 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 MIOSQ9NXC5 875 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 HCSTQ9UBK5 93 aa18.36■□□□□ 0.53
CCDC38-203ENST00000546803 ZC3H11AO75152 810 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC38-203ENST00000546803 SMC2O95347 1197 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 POU3F3P20264 500 aaPredicted RBP18.35■□□□□ 0.53
CCDC38-203ENST00000546803 GARTP22102 1010 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 BCAR1P56945 870 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 OSTNP61366 133 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 SNRPFP62306 86 aaKnown RBP18.35■□□□□ 0.53
CCDC38-203ENST00000546803 POU5F1Q01860 360 aaKnown RBP18.35■□□□□ 0.53
CCDC38-203ENST00000546803 DSC1Q08554 894 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 XKR4Q5GH76 650 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 SCFD1Q8WVM8 642 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 POMGNT1Q8WZA1 660 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 LMAN2LQ9H0V9 348 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 PLEKHA5Q9HAU0 1116 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 RMND1Q9NWS8 449 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 SPG21Q9NZD8 308 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 LMCD1Q9NZU5 365 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
CCDC38-203ENST00000546803 TCHHQ07283 1943 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 RFXAPO00287 272 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 PTGESO14684 152 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 KIAA0391O15091 583 aaKnown RBP18.34■□□□□ 0.53
CCDC38-203ENST00000546803 LPXNO60711 386 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 DDHD2O94830 711 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 KIF20AO95235 890 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 ALDH2P05091 517 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 THP07101 528 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GALTP07902 379 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 PLCB3Q01970 1234 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 UBE3AQ05086 875 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 STK4Q13043 487 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 PNOCQ13519 176 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 PTPROQ16827 1216 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 ALKAL1Q6UXT8 129 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 ZNF280BQ86YH2 543 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 KLHL23Q8NBE8 558 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 MYLIPQ8WY64 445 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 SNX27Q96L92 541 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GSDMAQ96QA5 445 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GTPBP4Q9BZE4 634 aaKnown RBP18.34■□□□□ 0.53
CCDC38-203ENST00000546803 GBP3Q9H0R5 595 aa18.34■□□□□ 0.53
CCDC38-203ENST00000546803 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
CCDC38-203ENST00000546803 LAMA3Q16787 3333 aa18.33■□□□□ 0.53
CCDC38-203ENST00000546803 TISP43B9A030 160 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 FAM189A1O60320 539 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 FGF18O76093 207 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 LDHAP00338 332 aaKnown RBP18.33■□□□□ 0.52
CCDC38-203ENST00000546803 FOSL2P15408 326 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 ADSSP30520 456 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 HOXD13P35453 343 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 KRT17Q04695 432 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 KNOP1Q1ED39 458 aaKnown RBP18.33■□□□□ 0.52
CCDC38-203ENST00000546803 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 HS2ST1Q7LGA3 356 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 SLC39A11Q8N1S5 342 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 KIAA0895Q8NCT3 520 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 SMARCE1Q969G3 411 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 TSPAN18Q96SJ8 248 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 IKZF4Q9H2S9 585 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.52
CCDC38-203ENST00000546803 CNTN3Q9P232 1028 aa18.33■□□□□ 0.52
CCDC38-203ENST00000546803 CGNQ9P2M7 1197 aaKnown RBP18.33■□□□□ 0.52
CCDC38-203ENST00000546803 CPSF3Q9UKF6 684 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms