RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
CIT-217ENST00000545913 ATP6V1G3Q96LB4 118 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 CHUKO15111 745 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 OCM2P0CE71 109 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
CIT-217ENST00000545913 ZNF235Q14590 738 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 TTC30BQ8N4P2 665 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 ZFATQ9P243 1243 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 H0Y3Z8 333 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 SLC16A3O15427 465 aaKnown RBP12.37□□□□□ -0.43
CIT-217ENST00000545913 LBRQ14739 615 aaKnown RBP12.37□□□□□ -0.43
CIT-217ENST00000545913 GTPBP10A4D1E9 387 aaKnown RBP12.37□□□□□ -0.43
CIT-217ENST00000545913 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 KCNA4P22459 653 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 CDC27P30260 824 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 ARFIP2P53365 341 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 PDIA5Q14554 519 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 NDFIP2Q9NV92 336 aa12.37□□□□□ -0.43
CIT-217ENST00000545913 CASP1P29466 404 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 KCND2Q9NZV8 630 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PCDHGB4Q9UN71 923 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 TTC26A0AVF1 554 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PIDD1Q9HB75 910 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 UBA6A0AVT1 1052 aaPredicted RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 TRAPPC3O43617 180 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 TERF2Q15554 542 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 ZNF746Q6NUN9 644 aaPredicted RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 A8MXQ7 604 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 MRPS25P82663 173 aaKnown RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 FOXD4Q12950 439 aaPredicted RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 MMS22LQ6ZRQ5 1243 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 CYFIP1Q7L576 1253 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 MFN1Q8IWA4 741 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PPHLN1Q8NEY8 458 aaKnown RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 PGBD4Q96DM1 585 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 NR1H4Q96RI1 486 aaPredicted RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PSMD3O43242 534 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 CEP70Q8NHQ1 597 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 AIPL1Q9NZN9 384 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 PXDNLA1KZ92 1463 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 MED14O60244 1454 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 IL10P22301 178 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 STAT4Q14765 748 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 BTBD8Q5XKL5 378 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 DDIASQ8IXT1 998 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 RNPC3Q96LT9 517 aaKnown RBP12.36□□□□□ -0.43
CIT-217ENST00000545913 DACH2Q96NX9 599 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 EYA4O95677 639 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 OLFM3Q96PB7 478 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 ITM2BQ9Y287 266 aa12.36□□□□□ -0.43
CIT-217ENST00000545913 ARHGAP10A1A4S6 786 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 PDXKO00764 312 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 KRT17Q04695 432 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 P3H1Q32P28 736 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 LRRC8BQ6P9F7 803 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 KIF2CQ99661 725 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ECT2Q9H8V3 914 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ASB14A6NK59 587 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 TPI1P60174 286 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
CIT-217ENST00000545913 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 STK25O00506 426 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 EIF3EP60228 445 aaKnown RBP12.35□□□□□ -0.43
CIT-217ENST00000545913 MED21Q13503 144 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 RCOR2Q8IZ40 523 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 KCNN4O15554 427 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ADORA2BP29275 332 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 SERPINB10P48595 397 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 PBXIP1Q96AQ6 731 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
CIT-217ENST00000545913 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 SPP2Q13103 211 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
CIT-217ENST00000545913 ZC3H12BQ5HYM0 836 aaKnown RBP12.35□□□□□ -0.43
CIT-217ENST00000545913 ATL2Q8NHH9 583 aa12.35□□□□□ -0.43
CIT-217ENST00000545913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
CIT-217ENST00000545913 SH3KBP1Q96B97 665 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms