RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	PARD3B	Q8TEW8	1205 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	DIS3L	Q8TF46	1054 aa	Known RBP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	SLC35C1	Q96A29	364 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	CCDC127	Q96BQ5	260 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PAWR	Q96IZ0	340 aa	Known RBP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PPP1R9B	Q96SB3	815 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	RPF1	Q9H9Y2	349 aa	Known RBP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ERVK-5	Q9HDB9	667 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	CPSF3	Q9UKF6	684 aa	Known RBP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ST3GAL5	Q9UNP4	418 aa		10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PITPNM1	O00562	1244 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	IL18RAP	O95256	599 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PARN	O95453	639 aa	Known RBP	10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	TPM1	P09493	284 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	TRIM49	P0CI25	452 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	TRIM49C	P0CI26	452 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	STAG3L1	P0CL83	205 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	GTF2H1	P32780	548 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	DEK	P35659	375 aa	Known RBP	10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	GRM5	P41594	1212 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	FMO5	P49326	533 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	YARS	P54577	528 aa	Known RBP	10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	TLE2	Q04725	743 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	SEZ6	Q53EL9	994 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	SPECC1L	Q69YQ0	1117 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	TWF2	Q6IBS0	349 aa	Known RBP	10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	VSTM4	Q8IW00	320 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	BRSK2	Q8IWQ3	736 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	CD302	Q8IX05	232 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	HACE1	Q8IYU2	909 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	SPC24	Q8NBT2	197 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ZSWIM2	Q8NEG5	633 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	FAM212A	Q96EL1	285 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PDLIM2	Q96JY6	352 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ACAP3	Q96P50	834 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ERGIC2	Q96RQ1	377 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	RNF39	Q9H2S5	420 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	INTS13	Q9NVM9	706 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	IMPACT	Q9P2X3	320 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	PADI3	Q9ULW8	664 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ATP11B	Q9Y2G3	1177 aa		10.9	□□□□□ -0.66
NPIPA1-208	ENST00000545831	ITIH6	Q6UXX5	1313 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GTPBP10	A4D1E9	387 aa	Known RBP	10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	P4HA2	O15460	535 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	FAM189A1	O60320	539 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	DLAT	P10515	647 aa	Known RBP	10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	SKI	P12755	728 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TNNI1	P19237	187 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CD52	P31358	61 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TNFSF9	P41273	254 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	AP3M2	P53677	418 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	MCCD1	P59942	119 aa	Predicted RBP	10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	OSTN	P61366	133 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	DLG4	P78352	724 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	MYL7	Q01449	175 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TRIM14	Q14142	442 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	LPIN1	Q14693	890 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	SYCP1	Q15431	976 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	ZBTB41	Q5SVQ8	909 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GBP6	Q6ZN66	633 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PPFIBP1	Q86W92	1011 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	IQCD	Q96DY2	449 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CGRRF1	Q99675	332 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	NUP58	Q9BVL2	599 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	HIPK3	Q9H422	1215 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	MMRN2	Q9H8L6	949 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	AGO3	Q9H9G7	860 aa	Known RBP	10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PDE11A	Q9HCR9	933 aa		10.89	□□□□□ -0.67
NPIPA1-208	ENST00000545831	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PMM2	O15305	246 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CLTB	P09497	229 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PBX1	P40424	430 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	MXI1	P50539	228 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	RAB27A	P51159	221 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	FAAP100	Q0VG06	881 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	EXOC3L4	Q17RC7	722 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	KRT39	Q6A163	491 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	WDR49	Q8IV35	697 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CEP120	Q8N960	986 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	NEK11	Q8NG66	645 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PLEKHO2	Q8TD55	490 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CACTIN	Q8WUQ7	758 aa	Known RBP	10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	EIF2A	Q9BY44	585 aa	Known RBP	10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	ASB7	Q9H672	318 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PLEKHA5	Q9HAU0	1116 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TMEM8A	Q9HCN3	771 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TMEM39A	Q9NV64	488 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PARP2	Q9UGN5	583 aa		10.88	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PHACTR2	O75167	634 aa		10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TNNC2	P02585	160 aa		10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TMEM191B	P0C7N4	346 aa		10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CXCL8	P10145	99 aa		10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TRIM21	P19474	475 aa	Known RBP	10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	EN2	P19622	333 aa	Predicted RBP	10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GCLM	P48507	274 aa		10.87	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GSDMD	P57764	484 aa		10.87	□□□□□ -0.67

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