RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MAPK7Q13164 816 aa23.28■■□□□ 1.32
SCARB1-210ENST00000545493 TUSC3Q13454 348 aa23.28■■□□□ 1.32
SCARB1-210ENST00000545493 DCAF4L1Q3SXM0 396 aa23.28■■□□□ 1.32
SCARB1-210ENST00000545493 ADPGKQ9BRR6 497 aa23.28■■□□□ 1.32
SCARB1-210ENST00000545493 COLEC11Q9BWP8 271 aa23.28■■□□□ 1.32
SCARB1-210ENST00000545493 VWA8A3KMH1 1905 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 H3BQV1 296 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 HIP1RO75146 1068 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 KIF4AO95239 1232 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 ADH1AP07327 375 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 NPTX2P47972 431 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 MCM2P49736 904 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 EFNA5P52803 228 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.32
SCARB1-210ENST00000545493 TAS1R3Q7RTX0 852 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 GPR149Q86SP6 731 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 PNMA5Q96PV4 448 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 DNM3Q9UQ16 869 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 SSX2IPQ9Y2D8 614 aa23.27■■□□□ 1.32
SCARB1-210ENST00000545493 PEX3P56589 373 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 SIGLEC14Q08ET2 396 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 HYIQ5T013 277 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 ATF7IP2Q5U623 682 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 RINT1Q6NUQ1 792 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 C1orf186Q6ZWK4 172 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 TDRD5Q8NAT2 981 aaKnown RBP23.26■■□□□ 1.31
SCARB1-210ENST00000545493 HASPINQ8TF76 798 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 ASIC4Q96FT7 647 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 ARHGAP28Q9P2N2 729 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 SMC3Q9UQE7 1217 aa23.26■■□□□ 1.31
SCARB1-210ENST00000545493 GLUD1P00367 558 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 RTP2Q5QGT7 225 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 ATAT1Q5SQI0 421 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 BMP8AQ7Z5Y6 402 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 CEP120Q8N960 986 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 GDAQ9Y2T3 454 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 TRIP11Q15643 1979 aa23.25■■□□□ 1.31
SCARB1-210ENST00000545493 VWA3AA6NCI4 1184 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 SPDYE4A6NLX3 237 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 DMP1Q13316 513 aaPredicted RBP23.24■■□□□ 1.31
SCARB1-210ENST00000545493 ZRSR1Q15695 479 aaKnown RBP23.24■■□□□ 1.31
SCARB1-210ENST00000545493 USP41Q3LFD5 358 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 KREMEN2Q8NCW0 462 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 CMASQ8NFW8 434 aaPredicted RBP23.24■■□□□ 1.31
SCARB1-210ENST00000545493 DRC1Q96MC2 740 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 CDT1Q9H211 546 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 SMOC2Q9H3U7 446 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 TNFSF13BQ9Y275 285 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 USTQ9Y2C2 406 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 SF3B1O75533 1304 aaKnown RBP eCLIP23.24■■□□□ 1.31
SCARB1-210ENST00000545493 DMDP11532 3685 aa23.24■■□□□ 1.31
SCARB1-210ENST00000545493 MYH11P35749 1972 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 MYO15AQ9UKN7 3530 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 CCDC169A6NNP5 214 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 THP07101 528 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 RPL17P18621 184 aaKnown RBP23.23■■□□□ 1.31
SCARB1-210ENST00000545493 TMEM119Q4V9L6 283 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 GLRA4Q5JXX5 417 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 C15orf39Q6ZRI6 1047 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 CCDC149Q6ZUS6 474 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 GPR65Q8IYL9 337 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 RIN2Q8WYP3 895 aaPredicted RBP23.23■■□□□ 1.31
SCARB1-210ENST00000545493 MFSD14AQ96MC6 490 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 ACO2Q99798 780 aaKnown RBP23.23■■□□□ 1.31
SCARB1-210ENST00000545493 PTPRHQ9HD43 1115 aa23.23■■□□□ 1.31
SCARB1-210ENST00000545493 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.23■■□□□ 1.31
SCARB1-210ENST00000545493 MTCL1Q9Y4B5 1905 aaKnown RBP23.23■■□□□ 1.31
SCARB1-210ENST00000545493 ABLIM1O14639 778 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 TADA2AO75478 443 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 ASGR2P07307 311 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 MYBP10242 640 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 GUCY2CP25092 1073 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 PRSS55Q6UWB4 352 aaPredicted RBP23.22■■□□□ 1.31
SCARB1-210ENST00000545493 ZBTB33Q86T24 672 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 GLYCTKQ8IVS8 523 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 ZDHHC14Q8IZN3 488 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 LRRC15Q8TF66 581 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 PPP1R10Q96QC0 940 aaKnown RBP23.22■■□□□ 1.31
SCARB1-210ENST00000545493 TMEM134Q9H6X4 195 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 KMT5AQ9NQR1 393 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 FNIP2Q9P278 1114 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 SORCS3Q9UPU3 1222 aa23.22■■□□□ 1.31
SCARB1-210ENST00000545493 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.22■■□□□ 1.31
SCARB1-210ENST00000545493 K7ERI5 159 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 TGM5O43548 720 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 RFPL2O75678 378 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 BRD1O95696 1058 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 PROZP22891 400 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 SLC12A3P55017 1021 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 RAD51AP2Q09MP3 1159 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 MTMR3Q13615 1198 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 ZNF568Q3ZCX4 644 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 ARL6IP4Q66PJ3 421 aaKnown RBP23.21■■□□□ 1.31
SCARB1-210ENST00000545493 PBXIP1Q96AQ6 731 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 PLIN2Q99541 437 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 TIPINQ9BVW5 301 aa23.21■■□□□ 1.31
SCARB1-210ENST00000545493 MRPL4Q9BYD3 311 aaKnown RBP23.21■■□□□ 1.31
SCARB1-210ENST00000545493 PDCD11Q14690 1871 aaKnown RBP23.21■■□□□ 1.31
SCARB1-210ENST00000545493 SLC16A4O15374 487 aa23.2■■□□□ 1.3
SCARB1-210ENST00000545493 PAPLNO95428 1278 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms