RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ERBB3P21860 1342 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 TBC1D4O60343 1298 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 CHGBP05060 677 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 CLEC4FQ8N1N0 589 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 CYGBQ8WWM9 190 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 SEPT5Q99719 369 aaPredicted RBP21.15■□□□□ 0.98
BPTF-208ENST00000544778 TRIM48Q8IWZ4 208 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 USP33Q8TEY7 942 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 MAP4K1Q92918 833 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 C17orf80Q9BSJ5 609 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 SH3BP1Q9Y3L3 701 aa21.15■□□□□ 0.98
BPTF-208ENST00000544778 LRRC14Q15048 493 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 E4F1Q66K89 784 aaPredicted RBP21.14■□□□□ 0.98
BPTF-208ENST00000544778 APOBEC3FQ8IUX4 373 aaKnown RBP21.14■□□□□ 0.98
BPTF-208ENST00000544778 GSPT2Q8IYD1 628 aaKnown RBP21.14■□□□□ 0.98
BPTF-208ENST00000544778 DIS3LQ8TF46 1054 aaKnown RBP21.14■□□□□ 0.98
BPTF-208ENST00000544778 FKBP9O95302 570 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 MAPRE2Q15555 327 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 FKBP9P1Q75LS8 142 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 INPP5DQ92835 1189 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 FAM162AQ96A26 154 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 AIFM3Q96NN9 605 aa21.14■□□□□ 0.98
BPTF-208ENST00000544778 ZBTB5O15062 677 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 FTLP02792 175 aaPredicted RBP21.14■□□□□ 0.97
BPTF-208ENST00000544778 AP3B2Q13367 1082 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 CD274Q9NZQ7 290 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L15C9J2P7 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L13C9JLJ4 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L11C9JVI0 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L18D6R9N7 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L22D6RA61 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L17D6RBQ6 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L19D6RCP7 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L20D6RJB6 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L24Q0WX57 530 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 PHKG1Q16816 387 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 USP17L6PQ6QN14 398 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 NDUFS3O75489 264 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 NR1H3Q13133 447 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 SGO1Q5FBB7 561 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 COPRSQ9NQ92 184 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 RNF146Q9NTX7 359 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 KLHL11Q9NVR0 708 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 NDE1Q9NXR1 346 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 FAM135BQ49AJ0 1406 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 CEP55Q53EZ4 464 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 VSTM4Q8IW00 320 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 ASCC2Q9H1I8 757 aaPredicted RBP21.14■□□□□ 0.97
BPTF-208ENST00000544778 TBC1D22BQ9NU19 505 aa21.14■□□□□ 0.97
BPTF-208ENST00000544778 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.14■□□□□ 0.97
BPTF-208ENST00000544778 TRIM49BA6NDI0 452 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 USP17L10C9JJH3 530 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 ATP8B1O43520 1251 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 MYBP10242 640 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 UNC13DQ70J99 1090 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 SNF8Q96H20 258 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 YIPF3Q9GZM5 350 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 PARVAQ9NVD7 372 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 LZTS3O60299 673 aaPredicted RBP21.13■□□□□ 0.97
BPTF-208ENST00000544778 PWP1Q13610 501 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 C6orf10Q5SRN2 563 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 LINC00301Q8NCQ3 95 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.13■□□□□ 0.97
BPTF-208ENST00000544778 ERFP50548 548 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 KCNH2Q12809 1159 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 HORMAD1Q86X24 394 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 PAPOLBQ9NRJ5 636 aaKnown RBP21.13■□□□□ 0.97
BPTF-208ENST00000544778 CCDC188H7C350 402 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 CENPPQ6IPU0 288 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 LATS2Q9NRM7 1088 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 ZNF711Q9Y462 761 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 TWF1Q12792 350 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 IYDQ6PHW0 289 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 SH3GLB2Q9NR46 395 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 C16orf72Q14CZ0 275 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 TRIM69Q86WT6 500 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 TMEM245Q9H330 911 aa21.13■□□□□ 0.97
BPTF-208ENST00000544778 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.13■□□□□ 0.97
BPTF-208ENST00000544778 ZNF500O60304 480 aaPredicted RBP21.12■□□□□ 0.97
BPTF-208ENST00000544778 STAT3P40763 770 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 ABCE1P61221 599 aaKnown RBP21.12■□□□□ 0.97
BPTF-208ENST00000544778 FGD2Q7Z6J4 655 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 NLRP10Q86W26 655 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 GOLGA8RI6L899 631 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 INPP5AQ14642 412 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 ARSEP51690 589 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 GYS2P54840 703 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 SESN2P58004 480 aaPredicted RBP21.12■□□□□ 0.97
BPTF-208ENST00000544778 EIF3EP60228 445 aaKnown RBP21.12■□□□□ 0.97
BPTF-208ENST00000544778 C1orf54Q8WWF1 131 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 FAM167BQ9BTA0 163 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 PKD2L2Q9NZM6 624 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 ALDH1A2O94788 518 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 ATXN3P54252 364 aaPredicted RBP21.12■□□□□ 0.97
BPTF-208ENST00000544778 RAD54LQ92698 747 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 ZBTB7AO95365 584 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 CTSHP09668 335 aa21.12■□□□□ 0.97
BPTF-208ENST00000544778 MLNP12872 115 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms