RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ALKAL1Q6UXT8 129 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 ZNF280BQ86YH2 543 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 KLHL23Q8NBE8 558 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 GLIS3Q8NEA6 775 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 URGCPQ8TCY9 931 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 HPS3Q969F9 1004 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 APOL6Q9BWW8 343 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 CXCL16Q9H2A7 254 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 AAASQ9NRG9 546 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 MYO7AQ13402 2215 aa20.94■□□□□ 0.94
DDX55-211ENST00000544429 A0A0B4J269 797 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 PTGESO14684 152 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 GRM6O15303 877 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 CLDN3O15551 220 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 GTPBP6O43824 516 aaPredicted RBP20.93■□□□□ 0.94
DDX55-211ENST00000544429 POMCP01189 267 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 BCAR1P56945 870 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 NAB2Q15742 525 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 SLC39A11Q8N1S5 342 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 SPPL3Q8TCT6 385 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 IKZF4Q9H2S9 585 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 DNAJB4Q9UDY4 337 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 PCDHB13Q9Y5F0 798 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 PCDHB12Q9Y5F1 795 aa20.93■□□□□ 0.94
DDX55-211ENST00000544429 ANK1P16157 1881 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 ANKRD63C9JTQ0 380 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 GCNT3O95395 438 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 GALTP07902 379 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 HOXD13P35453 343 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 LIG4P49917 911 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 SCNN1GP51170 649 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 PLCB3Q01970 1234 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 FAM160A1Q05DH4 1040 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 DPYDQ12882 1025 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 FAM26FQ5R3K3 315 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 ZBTB33Q86T24 672 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 COLGALT2Q8IYK4 626 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 MRPL38Q96DV4 380 aaKnown RBP20.92■□□□□ 0.94
DDX55-211ENST00000544429 ZNF558Q96NG5 402 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 TCHPQ9BT92 498 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 LMAN2LQ9H0V9 348 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 KLK14Q9P0G3 267 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 ANKFY1Q9P2R3 1169 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 PARP2Q9UGN5 583 aa20.92■□□□□ 0.94
DDX55-211ENST00000544429 CARNS1A5YM72 827 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 GOLGA6L4A6NEF3 574 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 TISP43B9A030 160 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 EIF3DO15371 548 aaKnown RBP eCLIP20.91■□□□□ 0.94
DDX55-211ENST00000544429 FGF18O76093 207 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 PRR29P0C7W0 189 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 DNAJB1P25685 340 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 ADSSP30520 456 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 PPM1AP35813 382 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 PBX3P40426 434 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 UBE3AQ05086 875 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 GRIK3Q13003 919 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 ZNF507Q8TCN5 953 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 BICD1Q96G01 975 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 ACCSQ96QU6 501 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 TMEM175Q9BSA9 504 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 LZTS1Q9Y250 596 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 GDAQ9Y2T3 454 aa20.91■□□□□ 0.94
DDX55-211ENST00000544429 ZC3H11AO75152 810 aaKnown RBP eCLIP20.9■□□□□ 0.94
DDX55-211ENST00000544429 GADD45BO75293 160 aaPredicted RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 EFEMP2O95967 443 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 ADRB2P07550 413 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 SLC11A1P49279 550 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 ALDH7A1P49419 539 aaKnown RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 RNASELQ05823 741 aaKnown RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 BMT2Q1RMZ1 405 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 SPOUT1Q5T280 376 aaKnown RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 TMEM173Q86WV6 379 aaPredicted RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 THNSL1Q8IYQ7 743 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 SNX27Q96L92 541 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 TIGD1Q96MW7 591 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 CCDC94Q9BW85 323 aaPredicted RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 ALG13Q9NP73 1137 aaKnown RBP20.9■□□□□ 0.94
DDX55-211ENST00000544429 SPG21Q9NZD8 308 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 CNTN3Q9P232 1028 aa20.9■□□□□ 0.94
DDX55-211ENST00000544429 UBE4BO95155 1302 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 OGTO15294 1046 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 PRPF6O94906 941 aaKnown RBP20.89■□□□□ 0.93
DDX55-211ENST00000544429 SLC10A6Q3KNW5 377 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 SLFN12LQ6IEE8 588 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 KANK3Q6NY19 840 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 ELOA2Q8IYF1 753 aaPredicted RBP20.89■□□□□ 0.93
DDX55-211ENST00000544429 BCL7CQ8WUZ0 217 aaPredicted RBP20.89■□□□□ 0.93
DDX55-211ENST00000544429 SCFD1Q8WVM8 642 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 ACAP3Q96P50 834 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 PPP1R10Q96QC0 940 aaKnown RBP20.89■□□□□ 0.93
DDX55-211ENST00000544429 TMEM206Q9H813 350 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 TOPORSQ9NS56 1045 aaPredicted RBP20.89■□□□□ 0.93
DDX55-211ENST00000544429 EXOC7Q9UPT5 735 aa20.89■□□□□ 0.93
DDX55-211ENST00000544429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.88■□□□□ 0.93
DDX55-211ENST00000544429 NR1I2O75469 434 aa20.88■□□□□ 0.93
DDX55-211ENST00000544429 RPN1P04843 607 aaKnown RBP20.88■□□□□ 0.93
DDX55-211ENST00000544429 CLTAP09496 248 aa20.88■□□□□ 0.93
DDX55-211ENST00000544429 KCNE1P15382 129 aa20.88■□□□□ 0.93
DDX55-211ENST00000544429 IGFBP4P22692 258 aa20.88■□□□□ 0.93
DDX55-211ENST00000544429 OSTNP61366 133 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms