RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 OLFML2BQ68BL8 750 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 IQCEQ6IPM2 695 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 GJB7Q6PEY0 223 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 RHPN2Q8IUC4 686 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 GDAP1L1Q96MZ0 367 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 HINFPQ9BQA5 517 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 TUT1Q9H6E5 874 aaKnown RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 KIAA1586Q9HCI6 787 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 AJAP1Q9UKB5 411 aaPredicted RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 GNEQ9Y223 722 aaKnown RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 TNPO2O14787 897 aaKnown RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 EXTL3O43909 919 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 JAM2P57087 298 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 IGBP1P78318 339 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ARID5AQ03989 594 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ENPEPQ07075 957 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 CETN1Q12798 172 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ENOX2Q16206 610 aaKnown RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ASIC2Q16515 512 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 DGKDQ16760 1214 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 METTL13Q8N6R0 699 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 ZBTB45Q96K62 511 aaPredicted RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 OSBPL9Q96SU4 736 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 APBA2Q99767 749 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 FAM213AQ9BRX8 229 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 HAPLN2Q9GZV7 340 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 TMEM117Q9H0C3 514 aa15.49■□□□□ 0.07
VPS33A-209ENST00000544349 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
VPS33A-209ENST00000544349 COL1A2P08123 1366 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 TARSL2A2RTX5 802 aaKnown RBP15.48■□□□□ 0.07
VPS33A-209ENST00000544349 ZNF233A6NK53 670 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 MAGEB2O15479 319 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 ASAP2O43150 1006 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 MSCO60682 206 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 KLRC1P26715 233 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 CTGFP29279 349 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 CLCN3P51790 818 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 GRM1Q13255 1194 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 IRF2BP2Q7Z5L9 587 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 ZBTB8OSQ8IWT0 167 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 HDAC7Q8WUI4 952 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 CCDC127Q96BQ5 260 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 RPGRIP1Q96KN7 1286 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 TLR10Q9BXR5 811 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 PACSIN1Q9BY11 444 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 C2orf40Q9H1Z8 148 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 FAN1Q9Y2M0 1017 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 DAAM1Q9Y4D1 1078 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 MGAMO43451 1857 aa15.48■□□□□ 0.07
VPS33A-209ENST00000544349 DYNC1LI2O43237 492 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 IGHA2P01877 340 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 GJB1P08034 283 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 MXI1P50539 228 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 TFDP1Q14186 410 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 ZPBP2Q6X784 338 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 USP37Q86T82 979 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 LINC01465Q8N7H1 131 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 ALS2CR12Q96Q35 445 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 STK33Q9BYT3 514 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 VPS18Q9P253 973 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 DNAJC12Q9UKB3 198 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 HYOU1Q9Y4L1 999 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 A0A087X0T9 212 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 A0A0B4J269 797 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 A6NJR5 290 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 LDHAP00338 332 aaKnown RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 FAM228BP0C875 321 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 KLHL30Q0D2K2 578 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 KRT39Q6A163 491 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 PHLDB3Q6NSJ2 640 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 ZNF572Q7Z3I7 529 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 MRPL4Q9BYD3 311 aaKnown RBP15.47■□□□□ 0.07
VPS33A-209ENST00000544349 TMEM8AQ9HCN3 771 aa15.47■□□□□ 0.07
VPS33A-209ENST00000544349 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 PRKCBP05771 671 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 TUBBP07437 444 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 GTF2H1P32780 548 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 TNNT3P45378 269 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-209ENST00000544349 NLRP11P59045 1033 aaKnown RBP15.46■□□□□ 0.07
VPS33A-209ENST00000544349 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 MAPK6Q16659 721 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 CRELD2Q6UXH1 353 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-209ENST00000544349 NLRP4Q96MN2 994 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 ANKFY1Q9P2R3 1169 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 ADAM21Q9UKJ8 722 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 HPCAL4Q9UM19 191 aa15.46■□□□□ 0.07
VPS33A-209ENST00000544349 RFX1P22670 979 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 PRKCIP41743 596 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 STAT1P42224 750 aa15.46■□□□□ 0.06
VPS33A-209ENST00000544349 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.06
VPS33A-209ENST00000544349 ACOT2P49753 483 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms