RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SERPINA10Q9UK55 444 aa14.71□□□□□ -0.05
VPS33A-208ENST00000543633 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 LYPLA2O95372 231 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ALADP13716 330 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 FMO1Q01740 532 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 TCP10Q12799 353 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ZNF268Q14587 947 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 RRP1BQ14684 758 aaKnown RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 GALNTL6Q49A17 601 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 PADI6Q6TGC4 694 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 CEP128Q6ZU80 1094 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 EXOC3L1Q86VI1 746 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 SNF8Q96H20 258 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 NUP85Q9BW27 656 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 MOV10L1Q9BXT6 1211 aaKnown RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 CDC42EP4Q9H3Q1 356 aaKnown RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 VEZTQ9HBM0 779 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 LGALS13Q9UHV8 139 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 COQ4Q9Y3A0 265 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 LOC102724159A0A0B4J2E5 919 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 SMIM23A6NLE4 172 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 GDF11O95390 407 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 SGPL1O95470 568 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 CFBP00751 764 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 GH2P01242 217 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 SLURP2P0DP57 97 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 PLS3P13797 630 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 GTF2BQ00403 316 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 CDR2Q01850 454 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 PWP2Q15269 919 aaKnown RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ZNF653Q96CK0 615 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 FAM81BQ96LP2 452 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 TMX4Q9H1E5 349 aaPredicted RBP14.7□□□□□ -0.06
VPS33A-208ENST00000543633 HSPBP1Q9NZL4 362 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ACTL7BQ9Y614 415 aa14.7□□□□□ -0.06
VPS33A-208ENST00000543633 ANKRD63C9JTQ0 380 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 IPO5O00410 1097 aaKnown RBP14.69□□□□□ -0.06
VPS33A-208ENST00000543633 ZBTB39O15060 712 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 SORBS3O60504 671 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 ATP2C2O75185 946 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 GJB6O95452 261 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 P4HBP07237 508 aaKnown RBP14.69□□□□□ -0.06
VPS33A-208ENST00000543633 DLG4P78352 724 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 TLDC1Q6P9B6 456 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 CEP57Q86XR8 500 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 RELL1Q8IUW5 271 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 CHURC1Q8WUH1 139 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 C7orf43Q8WVR3 580 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 KIFAP3Q92845 792 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 ARHGEF2Q92974 986 aaKnown RBP14.69□□□□□ -0.06
VPS33A-208ENST00000543633 TMEM117Q9H0C3 514 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 EBF2Q9HAK2 575 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 AVENQ9NQS1 362 aaPredicted RBP14.69□□□□□ -0.06
VPS33A-208ENST00000543633 DONSONQ9NYP3 566 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 HERC5Q9UII4 1024 aaKnown RBP14.69□□□□□ -0.06
VPS33A-208ENST00000543633 ADGRA3Q8IWK6 1321 aa14.69□□□□□ -0.06
VPS33A-208ENST00000543633 NQO1P15559 274 aaKnown RBP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 SKIV2L2P42285 1042 aaKnown RBP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 GCLMP48507 274 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 GPC3P51654 580 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 NCALDP61601 193 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 CENPCQ03188 943 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 KRT17Q04695 432 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 PTP4A2Q12974 167 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TNIP1Q15025 636 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 DACT2Q5SW24 774 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 FAM160B2Q86V87 743 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 RIBC1Q8N443 379 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 BBOF1Q8ND07 529 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 DYDC1Q8WWB3 177 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 CKAP2Q8WWK9 683 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 GRAMD1AQ96CP6 724 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TRIM11Q96F44 468 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 IFT74Q96LB3 600 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 KREMEN1Q96MU8 473 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 MXRA8Q9BRK3 442 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 FOXP3Q9BZS1 431 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 AAASQ9NRG9 546 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 ARL2BPQ9Y2Y0 163 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 SCN9AQ15858 1988 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TCRBV7S2A1N4TA0A589 114 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TMEM120BA0PK00 339 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TTC4O95801 387 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 GAS8O95995 478 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 MYBL1P10243 752 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 GTF2H1P32780 548 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 SLC1A1P43005 524 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 CACNB3P54284 484 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 CCDC15Q0P6D6 951 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 ACAD10Q6JQN1 1059 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 ZNF746Q6NUN9 644 aaPredicted RBP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 VSTM1Q6UX27 236 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS33A-208ENST00000543633 ENOSF1Q7L5Y1 443 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 MIER3Q7Z3K6 550 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 RDH13Q8NBN7 331 aa14.68□□□□□ -0.06
VPS33A-208ENST00000543633 TMC2Q8TDI7 906 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms