RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RAD51CO43502 376 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 ECE2O60344 883 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 PDE5AO76074 875 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 CYP1A1P04798 512 aaPredicted RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 HARSP12081 509 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 EEF1GP26641 437 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 TUFMP49411 452 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 COG7P83436 770 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 LRRC8BQ6P9F7 803 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 ZNF449Q6P9G9 518 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 DTX3LQ8TDB6 740 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 ATP6V0A1Q93050 837 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 IFIH1Q9BYX4 1025 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 RAB34Q9BZG1 259 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 MLXIPLQ9NP71 852 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 NLRC4Q9NPP4 1024 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 LAMB1P07942 1786 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 COL24A1Q17RW2 1714 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 TRAF5O00463 557 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 WFS1O76024 890 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 FECHP22830 423 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 ARPC4P59998 168 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 KCTD21Q4G0X4 260 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 FAAH2Q6GMR7 532 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 POTEEQ6S8J3 1075 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 CCDC84Q86UT8 332 aaPredicted RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 HAS1Q92839 578 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 IQCDQ96DY2 449 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 DHTKD1Q96HY7 919 aaPredicted RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 THAP9Q9H5L6 903 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 CLIC5Q9NZA1 410 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 BICDL2A1A5D9 508 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 STK10O94804 968 aaKnown RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 GH2P01242 217 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 GSTT2P0CG29 244 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 GSTT2BP0CG30 244 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 VAV1P15498 845 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 DNM2P50570 870 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 WDR59Q6PJI9 974 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 CASP10Q92851 521 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 FAM136AQ96C01 138 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 PBKQ96KB5 322 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 C7orf25Q9BPX7 421 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 TUBA8Q9NY65 449 aaPredicted RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 BTBD7Q9P203 1132 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 NAV1Q8NEY1 1877 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 POTEFA5A3E0 1075 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 SNX3O60493 162 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 POTEIP0CG38 1075 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 CD97P48960 835 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 NEK2P51955 445 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 ITIH3Q06033 890 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 TBL3Q12788 808 aaKnown RBP12.04□□□□□ -0.48
CDH4-201ENST00000543233 PLS1Q14651 629 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 RIC8AQ9NPQ8 531 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
CDH4-201ENST00000543233 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 DDX60LQ5H9U9 1706 aaKnown RBP12.03□□□□□ -0.48
CDH4-201ENST00000543233 F5H6K3 240 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 RAD17O75943 681 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 TARSP26639 723 aaKnown RBP12.03□□□□□ -0.48
CDH4-201ENST00000543233 HALP42357 657 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 JAG1P78504 1218 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 KLRC3Q07444 240 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 HERC4Q5GLZ8 1057 aaPredicted RBP12.03□□□□□ -0.48
CDH4-201ENST00000543233 SYDE2Q5VT97 1194 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 FITM2Q8N6M3 262 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 CYP2W1Q8TAV3 490 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 ZNF507Q8TCN5 953 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 MORC4Q8TE76 937 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 ATP8B4Q8TF62 1192 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 RAD54LQ92698 747 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 LRRC4CQ9HCJ2 640 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 HSFX1Q9UBD0 423 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 CTNNAL1Q9UBT7 734 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 MYH1P12882 1939 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 TCP11X1B4DZS4 312 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 H0YIN7 160 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 CHMP2AO43633 222 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 ATP9BO43861 1147 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 GM2AP17900 193 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 TNNC1P63316 161 aa12.03□□□□□ -0.48
CDH4-201ENST00000543233 ZNF394Q53GI3 561 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms