RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 RIN2Q8WYP3 895 aaPredicted RBP17.16■□□□□ 0.34
CSF1R-209ENST00000543093 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 RTP3Q9BQQ7 232 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 NT5C3AQ9H0P0 336 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 GPRC5CQ9NQ84 441 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.34
CSF1R-209ENST00000543093 EPS15L1Q9UBC2 864 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 CACNG4Q9UBN1 327 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 KIF3AQ9Y496 699 aa17.16■□□□□ 0.34
CSF1R-209ENST00000543093 POTEMA6NI47 508 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 STK25O00506 426 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 TADA2AO75478 443 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 DTWD2Q8NBA8 298 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 NKD2Q969F2 451 aaPredicted RBP17.15■□□□□ 0.34
CSF1R-209ENST00000543093 SNX27Q96L92 541 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 MTMR9Q96QG7 549 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 FNIP2Q9P278 1114 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
CSF1R-209ENST00000543093 KRBA1A5PL33 1030 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 C1RP00736 705 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 XRCC6P12956 609 aaKnown RBP eCLIP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 MCM7P33993 719 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 MCM2P49736 904 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 CREMQ03060 361 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 ORC2Q13416 577 aaPredicted RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 ANGPT1Q15389 498 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 LILRA6Q6PI73 481 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 PRSS55Q6UWB4 352 aaPredicted RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 GET4Q7L5D6 327 aaPredicted RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 SLC44A3Q8N4M1 653 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 PAAF1Q9BRP4 392 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 PRKD2Q9BZL6 878 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 ZDHHC7Q9NXF8 308 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 WNT16Q9UBV4 365 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
CSF1R-209ENST00000543093 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
CSF1R-209ENST00000543093 PAPLNO95428 1278 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 RFX1P22670 979 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 RTP2Q5QGT7 225 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 NOSTRINQ8IVI9 506 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 ZBTB8OSQ8IWT0 167 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 NXPE3Q969Y0 559 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 TMEM60Q9H2L4 133 aa17.13■□□□□ 0.33
CSF1R-209ENST00000543093 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.33
CSF1R-209ENST00000543093 CASTOR2A6NHX0 329 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 ZMYND10O75800 440 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 CD2BP2O95400 341 aaKnown RBP17.12■□□□□ 0.33
CSF1R-209ENST00000543093 SRFP11831 508 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 LAMP2P13473 410 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 TUSC3Q13454 348 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 TMEM132AQ24JP5 1023 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
CSF1R-209ENST00000543093 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 MCPH1Q8NEM0 835 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
CSF1R-209ENST00000543093 FZD8Q9H461 694 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 SNTG2Q9NY99 539 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSF1R-209ENST00000543093 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
CSF1R-209ENST00000543093 TTLL13PA6NNM8 815 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 N4BP3O15049 544 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 MED24O75448 989 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 KIF4AO95239 1232 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 OR52Z1P0C646 297 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 FAM187BQ17R55 369 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 CEP57Q86XR8 500 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 PDZD7Q9H5P4 517 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 TBC1D17Q9HA65 648 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 VWA8A3KMH1 1905 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
CSF1R-209ENST00000543093 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 ANHXE9PGG2 379 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 PTGESO14684 152 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 RECQL4O94761 1208 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 LIG1P18858 919 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 FSHRP23945 695 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
CSF1R-209ENST00000543093 HTR4Q13639 388 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 PSMD5Q16401 504 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 GRASPQ7Z6J2 395 aaPredicted RBP17.1■□□□□ 0.33
CSF1R-209ENST00000543093 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms