RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 TMOD2Q9NZR1 351 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 SMIM23A6NLE4 172 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 ATMINO43313 823 aaPredicted RBP17.8■□□□□ 0.44
KDM2B-216ENST00000543025 RIPK2O43353 540 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 RARGP13631 454 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 COILP38432 576 aaPredicted RBP17.8■□□□□ 0.44
KDM2B-216ENST00000543025 GTF2BQ00403 316 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 DPY19L2Q6NUT2 758 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 SAMD1Q6SPF0 538 aaPredicted RBP17.8■□□□□ 0.44
KDM2B-216ENST00000543025 PPM1KQ8N3J5 372 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 PLEKHO2Q8TD55 490 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 CCT6BQ92526 530 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 NUP85Q9BW27 656 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
KDM2B-216ENST00000543025 KDM4CQ9H3R0 1056 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 PKD2L1Q9P0L9 805 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 PASKQ96RG2 1323 aa17.8■□□□□ 0.44
KDM2B-216ENST00000543025 TCP10L2B9ZVM9 353 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 FGFR4P22455 802 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 MFAP3P55082 362 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 HAUS6Q7Z4H7 955 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 SLC47A2Q86VL8 602 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 TAX1BP1Q86VP1 789 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 ANKS4BQ8N8V4 417 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 ART4Q93070 314 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 ST6GALNAC4Q9H4F1 302 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 CYP26A1O43174 497 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 CYP1A2P05177 515 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 GHRP10912 638 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 SCTRP47872 440 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 ZYXQ15942 572 aaKnown RBP17.79■□□□□ 0.44
KDM2B-216ENST00000543025 ZSWIM2Q8NEG5 633 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 KREMEN1Q96MU8 473 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 IWS1Q96ST2 819 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 A1CFQ9NQ94 594 aaKnown RBP17.79■□□□□ 0.44
KDM2B-216ENST00000543025 INTS9Q9NV88 658 aaKnown RBP17.79■□□□□ 0.44
KDM2B-216ENST00000543025 GTF3C4Q9UKN8 822 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
KDM2B-216ENST00000543025 TCRBV7S2A1N4TA0A589 114 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 ASAP2O43150 1006 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 HSD17B4P51659 736 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 IFI35P80217 286 aaPredicted RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 FMO1Q01740 532 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 CCDC91Q7Z6B0 441 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 C12orf50Q8NA57 414 aaPredicted RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 SHC3Q92529 594 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 ZNF653Q96CK0 615 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 UVRAGQ9P2Y5 699 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 ASTN2O75129 1339 aaPredicted RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 CHUKO15111 745 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 QARSP47897 775 aaKnown RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 RWDD2BP57060 319 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 SIX1Q15475 284 aaPredicted RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 EPS8L3Q8TE67 593 aaKnown RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 L3MBTL3Q96JM7 780 aaPredicted RBP17.78■□□□□ 0.44
KDM2B-216ENST00000543025 BTBD6Q96KE9 485 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 VEZTQ9HBM0 779 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 ACP6Q9NPH0 428 aa17.78■□□□□ 0.44
KDM2B-216ENST00000543025 RASGRF2O14827 1237 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 DHX15O43143 795 aaKnown RBP17.77■□□□□ 0.44
KDM2B-216ENST00000543025 ECEL1O95672 775 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 RARAP10276 462 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 PDE6CP51160 858 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.44
KDM2B-216ENST00000543025 CALCOCO2Q13137 446 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 TNFAIP8L3Q5GJ75 292 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 UBAP2Q5T6F2 1119 aaKnown RBP17.77■□□□□ 0.44
KDM2B-216ENST00000543025 TAOK1Q7L7X3 1001 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 NIPA1Q7RTP0 329 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 FUKQ8N0W3 1084 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 HVCN1Q96D96 273 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 PLVAPQ9BX97 442 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 CCDC134Q9H6E4 229 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 SCN4AP35499 1836 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 ANKRD63C9JTQ0 380 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 ADRB2P07550 413 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 CYP11B1P15538 503 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.44
KDM2B-216ENST00000543025 CNTNAP1P78357 1384 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 KRT39Q6A163 491 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 CYB5D1Q6P9G0 228 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 RNF207Q6ZRF8 634 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 UHMK1Q8TAS1 419 aaKnown RBP17.77■□□□□ 0.44
KDM2B-216ENST00000543025 TIPINQ9BVW5 301 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 LRRC19Q9H756 370 aa17.77■□□□□ 0.44
KDM2B-216ENST00000543025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.443e-7■■■■■ 119.5
KDM2B-216ENST00000543025 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 LYPLA2O95372 231 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 SLCO1A2P46721 670 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 KCNJ1P48048 391 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 NCKAP1LP55160 1127 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 PEX3P56589 373 aa17.76■□□□□ 0.43
KDM2B-216ENST00000543025 CDR2Q01850 454 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms