RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 SNUPNO95149 360 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 FTLP02792 175 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 VIL1P09327 827 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 GNAT1P11488 350 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 COMTP21964 271 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 KCNA3P22001 575 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ATP5DP30049 168 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 COILP38432 576 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 DRG2P55039 364 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 JAM2P57087 298 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CERKLQ49MI3 558 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CDC42EP5Q6NZY7 148 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 SLC30A9Q6PML9 568 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 VSTM1Q6UX27 236 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 C1orf54Q8WWF1 131 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CKAP2Q8WWK9 683 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ERP27Q96DN0 273 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 BTBD6Q96KE9 485 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ZDHHC15Q96MV8 337 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 NUDCD1Q96RS6 583 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 RIOX1Q9H6W3 641 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 TYW1Q9NV66 732 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 GGA3Q9NZ52 723 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 TRAF3IP3Q9Y228 551 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ANKRD62A6NC57 917 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PDXKO00764 312 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ECEL1O95672 775 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 OAS1P00973 400 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 DLATP10515 647 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PYGMP11217 842 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ANXA13P27216 316 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 HOXD13P35453 343 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ICA1Q05084 483 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 MPP2Q14168 576 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 RASA3Q14644 834 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PRR16Q569H4 304 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 MIGA2Q7L4E1 593 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 LONP2Q86WA8 852 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CATSPER3Q86XQ3 398 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ECHDC2Q86YB7 292 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CPNE8Q86YQ8 564 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ADGRF4Q8IZF3 695 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 SLC30A5Q8TAD4 765 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 SLC20A1Q8WUM9 679 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 MRRFQ96E11 262 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PRMT6Q96LA8 375 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 CCDC17Q96LX7 622 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PWWP2AQ96N64 755 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 STK33Q9BYT3 514 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 PPP1R12CQ9BZL4 782 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ROPN1BQ9BZX4 212 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 MYLK2Q9H1R3 596 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 BHMT2Q9H2M3 363 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ROPN1Q9HAT0 212 aaPredicted RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 ADARB2Q9NS39 739 aaKnown RBP5.68□□□□□ -1.5
KDM3B-209ENST00000542866 TXLNGQ9NUQ3 528 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 NUP98P52948 1817 aa5.68□□□□□ -1.5
KDM3B-209ENST00000542866 SPDYE2BA6NHP3 402 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 O00370 1275 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 SPAG7O75391 227 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 UNC5CO95185 931 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 GJB6O95452 261 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 SPDYE6P0CI01 402 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 NMT1P30419 496 aaKnown RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 EPHX2P34913 555 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 CHKAP35790 457 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 SLC12A3P55017 1021 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 INHBEP58166 350 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PPP4CP60510 307 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 FKBP1AP62942 108 aaKnown RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 MGAT5Q09328 741 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 IRF5Q13568 498 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 CCDC6Q16204 474 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 MUM1Q2TAK8 710 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 ZC2HC1CQ53FD0 456 aaPredicted RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 TMEM154Q6P9G4 183 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 KCTD1Q719H9 257 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 CERS5Q8N5B7 392 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 MYCT1Q8N699 235 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PIGOQ8TEQ8 1089 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PAPOLBQ9NRJ5 636 aaKnown RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 ZNF70Q9UC06 446 aaPredicted RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 NENFQ9UMX5 172 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 LTBP3Q9NS15 1303 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PNMA6FA0A0J9YX94 578 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 USP17L10C9JJH3 530 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 HSPA6P17066 643 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 CALB2P22676 271 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PSMC2P35998 433 aaKnown RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 FMO5P49326 533 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 PAPOLAP51003 745 aaKnown RBP5.67□□□□□ -1.5
KDM3B-209ENST00000542866 POLE2P56282 527 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 RWDD2BP57060 319 aa5.67□□□□□ -1.5
KDM3B-209ENST00000542866 KRT17Q04695 432 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms