RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 IGSF9BQ9UPX0 1349 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA8MH3BSY2 632 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ATP2A1O14983 1001 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 BRD2P25440 801 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 NOP14P78316 857 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PPP2R5CQ13362 524 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 IRF2BP1Q8IU81 584 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 C4orf19Q8IY42 314 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 NOA1Q8NC60 698 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 OSBPL9Q96SU4 736 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 MROH8Q9H579 483 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PRG3Q9Y2Y8 225 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 TIMM13Q9Y5L4 95 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 LTBP4Q8N2S1 1624 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 NUP98P52948 1817 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PHLPP2Q6ZVD8 1323 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PGRMC1O00264 195 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 SCP2P22307 547 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PSMA2P25787 234 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 GPC5P78333 572 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 LAMTOR4Q0VGL1 99 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 PAK2Q13177 524 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 SLC18A3Q16572 532 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 CYP4A22Q5TCH4 519 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 NT5DC1Q5TFE4 455 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ANKRD42Q8N9B4 389 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ZSWIM2Q8NEG5 633 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 SLC35G2Q8TBE7 412 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ZNF564Q8TBZ8 553 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 MED15Q96RN5 788 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 FERMT1Q9BQL6 677 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 OSGEPQ9NPF4 335 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 TBK1Q9UHD2 729 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 GAS8O95995 478 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 THPOP40225 353 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 KCNJ1P48048 391 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 MXD4Q14582 209 aaPredicted RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 C10orf76Q5T2E6 689 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 AMACRQ9UHK6 382 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 LCP1P13796 627 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 EFNA5P52803 228 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 HADHQ16836 314 aaKnown RBP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 HUS1O60921 280 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 GJB6O95452 261 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 SAT1P21673 171 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 ZNF280AP59817 542 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 SMTNL2Q2TAL5 461 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 SLC47A2Q86VL8 602 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 KCTD6Q8NC69 237 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 RBBP8NLQ8NC74 664 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 PPP1R14CQ8TAE6 165 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 SLC35C1Q96A29 364 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 ERGIC2Q96RQ1 377 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 STK33Q9BYT3 514 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 THAP2Q9H0W7 228 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 TXNRD2Q9NNW7 524 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 DAAM1Q9Y4D1 1078 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 TELO2Q9Y4R8 837 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 CEP290O15078 2479 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 CNTNAP1P78357 1384 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 ROBO3Q96MS0 1386 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 LRRC37A3O60309 1634 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 CICQ96RK0 1608 aaPredicted RBP10.85□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA6CA6NDK9 693 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 MMEP08473 750 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA6DP0CG33 693 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 MYL6P60660 151 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 PPP3CAQ08209 521 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 DRP2Q13474 957 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 IER5Q5VY09 327 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 TMEM35BQ8NCS4 154 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 ASAP3Q8TDY4 903 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 LRRC15Q8TF66 581 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 C2orf40Q9H1Z8 148 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA6AQ9NYA3 693 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 VAV3Q9UKW4 847 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 UBIAD1Q9Y5Z9 338 aa10.85□□□□□ -0.67
TOP3A-208ENST00000542570 COL18A1P39060 1754 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 B4GALT5O43286 388 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 OPA1O60313 960 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 SLC4A1P02730 911 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 GTF2H1P32780 548 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ITKQ08881 620 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 FAM102AQ5T9C2 384 aaPredicted RBP10.84□□□□□ -0.67
TOP3A-208ENST00000542570 KCNV1Q6PIU1 500 aa10.84□□□□□ -0.67
TOP3A-208ENST00000542570 ZNF571Q7Z3V5 609 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms