RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 PRPF4BQ13523 1007 aaKnown RBP21.96■■□□□ 1.11
DDX11-220ENST00000542244 LILRA6Q6PI73 481 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 MYADMQ96S97 322 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 BHMT2Q9H2M3 363 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 H0Y858 1186 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 HSP90AA2PQ14568 343 aaPredicted RBP21.95■■□□□ 1.1
DDX11-220ENST00000542244 C15orf39Q6ZRI6 1047 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 ZBTB8OSQ8IWT0 167 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 PLCD3Q8N3E9 789 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 CMASQ8NFW8 434 aaPredicted RBP21.95■■□□□ 1.1
DDX11-220ENST00000542244 PRIMPOLQ96LW4 560 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 KCNK12Q9HB15 430 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 STK39Q9UEW8 545 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 KIAA1024Q9UPX6 916 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 GDAQ9Y2T3 454 aa21.95■■□□□ 1.1
DDX11-220ENST00000542244 E9PMD0 336 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 ACKR2O00590 384 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 TADA2AO75478 443 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 NPR3P17342 541 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 NAMPTP43490 491 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 RBM25P49756 843 aaKnown RBP21.94■■□□□ 1.1
DDX11-220ENST00000542244 FXR2P51116 673 aaKnown RBP eCLIP21.94■■□□□ 1.1
DDX11-220ENST00000542244 TUSC3Q13454 348 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 USP41Q3LFD5 358 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 CWF19L1Q69YN2 538 aaKnown RBP21.94■■□□□ 1.1
DDX11-220ENST00000542244 CD300LGQ6UXG3 332 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 KCNK18Q7Z418 384 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 HACE1Q8IYU2 909 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 DAW1Q8N136 415 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 ERMNQ8TAM6 284 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 DEPTORQ8TB45 409 aa21.94■■□□□ 1.1
DDX11-220ENST00000542244 WDR6Q9NNW5 1121 aaKnown RBP21.94■■□□□ 1.1
DDX11-220ENST00000542244 DDX19AQ9NUU7 478 aaKnown RBP21.94■■□□□ 1.1
DDX11-220ENST00000542244 N4BP3O15049 544 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 PI15O43692 258 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 U2AF2P26368 475 aaKnown RBP eCLIP21.93■■□□□ 1.12e-7■■■□□ 17.2
DDX11-220ENST00000542244 PTGDRQ13258 359 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 MAPK6Q16659 721 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 GLRA4Q5JXX5 417 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 OTOP3Q7RTS5 596 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 CEP120Q8N960 986 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 SMG7Q92540 1137 aaKnown RBP21.93■■□□□ 1.1
DDX11-220ENST00000542244 CLSTN3Q9BQT9 956 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 MMTAG2Q9BU76 263 aaKnown RBP21.93■■□□□ 1.1
DDX11-220ENST00000542244 NT5C3AQ9H0P0 336 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 LRWD1Q9UFC0 647 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 SSX2IPQ9Y2D8 614 aa21.93■■□□□ 1.1
DDX11-220ENST00000542244 CLUHO75153 1309 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 NR1I2O75469 434 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 CD2BP2O95400 341 aaKnown RBP21.92■■□□□ 1.1
DDX11-220ENST00000542244 NTHL1P78549 312 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 ORC2Q13416 577 aaPredicted RBP21.92■■□□□ 1.1
DDX11-220ENST00000542244 TMEM132AQ24JP5 1023 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 TAS1R3Q7RTX0 852 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 TMEM130Q8N3G9 435 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 IGSF22Q8N9C0 903 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 FAM184AQ8NB25 1140 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 LNX1Q8TBB1 728 aaPredicted RBP21.92■■□□□ 1.1
DDX11-220ENST00000542244 ACSF2Q96CM8 615 aaPredicted RBP21.92■■□□□ 1.1
DDX11-220ENST00000542244 ZSCAN31Q96LW9 406 aaPredicted RBP21.92■■□□□ 1.1
DDX11-220ENST00000542244 C2orf40Q9H1Z8 148 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 GOLGA2P5Q9HBQ8 144 aa21.92■■□□□ 1.1
DDX11-220ENST00000542244 MEFVO15553 781 aaPredicted RBP21.91■■□□□ 1.1
DDX11-220ENST00000542244 PAPLNO95428 1278 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 GBP2P32456 591 aaPredicted RBP21.91■■□□□ 1.1
DDX11-220ENST00000542244 HMGN5P82970 282 aaKnown RBP21.91■■□□□ 1.1
DDX11-220ENST00000542244 MAPK7Q13164 816 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 TDGQ13569 410 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 GNL2Q13823 731 aaKnown RBP21.91■■□□□ 1.1
DDX11-220ENST00000542244 FAM171A1Q5VUB5 890 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 RSPO2Q6UXX9 243 aaPredicted RBP21.91■■□□□ 1.1
DDX11-220ENST00000542244 CEP57Q86XR8 500 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 SNX29Q8TEQ0 813 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 RUSC1Q9BVN2 902 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 FNIP2Q9P278 1114 aa21.91■■□□□ 1.1
DDX11-220ENST00000542244 ZMYM2Q9UBW7 1377 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 GALR2O43603 387 aaPredicted RBP21.9■■□□□ 1.1
DDX11-220ENST00000542244 THP07101 528 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 TRAPPC10P48553 1259 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 SOX4Q06945 474 aaPredicted RBP21.9■■□□□ 1.1
DDX11-220ENST00000542244 ATF7IP2Q5U623 682 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 C3orf58Q8NDZ4 430 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 FLCNQ8NFG4 579 aa21.9■■□□□ 1.1
DDX11-220ENST00000542244 SH2B1Q9NRF2 756 aaPredicted RBP21.9■■□□□ 1.1
DDX11-220ENST00000542244 VWA8A3KMH1 1905 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 USP34Q70CQ2 3546 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 I3L4J1 428 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 PEX3P56589 373 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 ASTLQ6HA08 431 aaPredicted RBP21.89■■□□□ 1.09
DDX11-220ENST00000542244 ATOH1Q92858 354 aaPredicted RBP21.89■■□□□ 1.09
DDX11-220ENST00000542244 PPP1R10Q96QC0 940 aaKnown RBP21.89■■□□□ 1.09
DDX11-220ENST00000542244 TTPALQ9BTX7 342 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 PRKD2Q9BZL6 878 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 NOL7Q9UMY1 257 aaKnown RBP21.89■■□□□ 1.09
DDX11-220ENST00000542244 DUSP12Q9UNI6 340 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 DOCK6Q96HP0 2047 aa21.89■■□□□ 1.09
DDX11-220ENST00000542244 SF3B1O75533 1304 aaKnown RBP eCLIP21.88■■□□□ 1.095e-8■■■■■ 71.1
DDX11-220ENST00000542244 KRBA1A5PL33 1030 aa21.88■■□□□ 1.09
DDX11-220ENST00000542244 SFI1A8K8P3 1242 aa21.88■■□□□ 1.09
DDX11-220ENST00000542244 HIP1RO75146 1068 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms