RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 B4GALT5O43286 388 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 TGM5O43548 720 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 AOC1P19801 751 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 NBL1P41271 181 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 NAMPTP43490 491 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
ITM2C-208ENST00000541852 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
ITM2C-208ENST00000541852 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
ITM2C-208ENST00000541852 HAUS3Q68CZ6 603 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 RTL10Q7L3V2 364 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 MAEAQ7L5Y9 396 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 FLCNQ8NFG4 579 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
ITM2C-208ENST00000541852 IFT74Q96LB3 600 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 TTPALQ9BTX7 342 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 TMEM60Q9H2L4 133 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 DENND4AQ7Z401 1863 aa16.5■□□□□ 0.23
ITM2C-208ENST00000541852 JAK2O60674 1132 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 DTNBO60941 627 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 LARGE1O95461 756 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 TRAPPC10P48553 1259 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
ITM2C-208ENST00000541852 PDIA5Q14554 519 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 SLC44A3Q8N4M1 653 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 DEPTORQ8TB45 409 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 KIFAP3Q92845 792 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 SMOC2Q9H3U7 446 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 FAM86C1Q9NVL1 165 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
ITM2C-208ENST00000541852 MED24O75448 989 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 RFPL2O75678 378 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 ZMYND10O75800 440 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 HNRNPA1P09651 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITM2C-208ENST00000541852 OR52Z1P0C646 297 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 DCAF4L1Q3SXM0 396 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 CDR2LQ86X02 465 aaPredicted RBP16.48■□□□□ 0.23
ITM2C-208ENST00000541852 PIK3R5Q8WYR1 880 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 ZNF707Q96C28 371 aaPredicted RBP16.48■□□□□ 0.23
ITM2C-208ENST00000541852 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
ITM2C-208ENST00000541852 GPRC5CQ9NQ84 441 aa16.48■□□□□ 0.23
ITM2C-208ENST00000541852 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 PHLPP2Q6ZVD8 1323 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 A0A087WWV3 80 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 STK25O00506 426 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 PRKCBP05771 671 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 SPATA31D3P0C874 917 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 SRFP11831 508 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 LAMP2P13473 410 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 NPR3P17342 541 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 HOXA9P31269 272 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
ITM2C-208ENST00000541852 ZNF174Q15697 407 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 SPATA31D4Q6ZUB0 917 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 SIX5Q8N196 739 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 FBXO18Q8NFZ0 1043 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 PDZD7Q9H5P4 517 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 SNTG2Q9NY99 539 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
ITM2C-208ENST00000541852 NOL7Q9UMY1 257 aaKnown RBP16.47■□□□□ 0.23
ITM2C-208ENST00000541852 WNT7AO00755 349 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 TRAPPC3O43617 180 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 N4BP1O75113 896 aaKnown RBP16.46■□□□□ 0.23
ITM2C-208ENST00000541852 RFX1P22670 979 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 FXR2P51116 673 aaKnown RBP eCLIP16.46■□□□□ 0.23
ITM2C-208ENST00000541852 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 DCLRE1AQ6PJP8 1040 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 CCDC105Q8IYK2 499 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 FAM184AQ8NB25 1140 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 UROC1Q96N76 676 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 MYADMQ96S97 322 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
ITM2C-208ENST00000541852 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
ITM2C-208ENST00000541852 RIF1Q5UIP0 2472 aaKnown RBP16.46■□□□□ 0.23
ITM2C-208ENST00000541852 ANHXE9PGG2 379 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 F8W810 466 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 K7ERI5 159 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 XYLBO75191 536 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 RECQL4O94761 1208 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 FOSBP53539 338 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 RTP2Q5QGT7 225 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
ITM2C-208ENST00000541852 PHLDB3Q6NSJ2 640 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 POTEGQ6S5H5 508 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
ITM2C-208ENST00000541852 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 NOSTRINQ8IVI9 506 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 LNX1Q8TBB1 728 aaPredicted RBP16.45■□□□□ 0.22
ITM2C-208ENST00000541852 NKD2Q969F2 451 aaPredicted RBP16.45■□□□□ 0.22
ITM2C-208ENST00000541852 SHDQ96IW2 340 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 B3GALT6Q96L58 329 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 CLSTN3Q9BQT9 956 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 CCDC113Q9H0I3 377 aa16.45■□□□□ 0.22
ITM2C-208ENST00000541852 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms