RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 KRT85P78386 507 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 CYP4A11Q02928 519 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 CEBPZQ03701 1054 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 DNM1Q05193 864 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 STK38Q15208 465 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 TARBP2Q15633 366 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 HYIQ5T013 277 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 SPATA31D4Q6ZUB0 917 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 ANO5Q75V66 913 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 OTUD6AQ7L8S5 288 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 CATSPER3Q86XQ3 398 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 KSR1Q8IVT5 923 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 C1orf210Q8IVY1 113 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 TPH2Q8IWU9 490 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 FOXQ1Q9C009 403 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 INO80BQ9C086 356 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 WDR6Q9NNW5 1121 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 ARHGEF3Q9NR81 526 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 SUCLA2Q9P2R7 463 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 WRAP73Q9P2S5 460 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 PRG3Q9Y2Y8 225 aaPredicted RBP9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 DCHS1Q96JQ0 3298 aa9.63□□□□□ -0.87
CLSTN3-212ENST00000541770 PATJQ8NI35 1801 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 NRP1O14786 923 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 LRRN2O75325 713 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 YWHABP31946 246 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 CCT6AP40227 531 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 OR1G1P47890 313 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 CDC42EP1Q00587 391 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 GRIN1Q05586 938 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 DCLRE1AQ6PJP8 1040 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 AGMOQ6ZNB7 445 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 TAS1R1Q7RTX1 841 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 PALB2Q86YC2 1186 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 EXOC8Q8IYI6 725 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 ZNF579Q8NAF0 562 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 SNX29Q8TEQ0 813 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 RSPH1Q8WYR4 309 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 NT5C3AQ9H0P0 336 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 RSAD1Q9HA92 442 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 ANKEF1Q9NU02 776 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 SPATA6Q9NWH7 488 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 CHMP5Q9NZZ3 219 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 STK39Q9UEW8 545 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 DPP7Q9UHL4 492 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 RCOR1Q9UKL0 485 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 SSX2IPQ9Y2D8 614 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 PCDHB2Q9Y5E7 798 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 DOCK8Q8NF50 2099 aa9.62□□□□□ -0.87
CLSTN3-212ENST00000541770 COL4A3Q01955 1670 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 PP2D1A8MPX8 630 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 TEX28O15482 410 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 LILRB3O75022 631 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 SOD2P04179 222 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 CDC25AP30304 524 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 GLUD2P49448 558 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 AFF1P51825 1210 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 ECM1Q16610 540 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 ZNF410Q86VK4 478 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 CMASQ8NFW8 434 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 NXPE3Q969Y0 559 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 JPH2Q9BR39 696 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 TMEM175Q9BSA9 504 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 HERC2P3Q9BVR0 1158 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 CCSER1Q9C0I3 900 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 SCAND2PQ9GZW5 306 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 CSRNP2Q9H175 543 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 DLL3Q9NYJ7 618 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 KANSL3Q9P2N6 904 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 EPS15L1Q9UBC2 864 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 NUMBLQ9Y6R0 609 aa9.61□□□□□ -0.87
CLSTN3-212ENST00000541770 DMDP11532 3685 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 RIF1Q5UIP0 2472 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 VPS13AQ96RL7 3174 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 IGKV6-21A0A0C4DH24 114 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 ZBTB39O15060 712 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 LAMTOR5O43504 91 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 GAS2O43903 313 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 CUTAO60888 179 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 ZNF623O75123 536 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 MAFO75444 373 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 SRGAP2CP0DJJ0 459 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 LAMP2P13473 410 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 RFC5P40937 340 aa9.6□□□□□ -0.87
CLSTN3-212ENST00000541770 UBA7P41226 1012 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms