RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SLC16A3O15427 465 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 ASNSP08243 561 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 PDE6CP51160 858 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 GTF2A1P52655 376 aaPredicted RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 HIRAP54198 1017 aaPredicted RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 DRP2Q13474 957 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 PGM5Q15124 567 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 FAM47EQ6ZV65 393 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 JDP2Q8WYK2 163 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 HAUS2Q9NVX0 235 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 STXBP5LQ9Y2K9 1186 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 LIG4P49917 911 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 NLRP11P59045 1033 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 PPP2R2AP63151 447 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 CCDC121Q6ZUS5 278 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 OLIG1Q8TAK6 271 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 JPH2Q9BR39 696 aaPredicted RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 IGBP1P78318 339 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 FMO1Q01740 532 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 INTS8Q75QN2 995 aaKnown RBP16.1■□□□□ 0.17
VARS2-211ENST00000541562 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
VARS2-211ENST00000541562 CCDC60Q8IWA6 550 aaPredicted RBP16.1■□□□□ 0.17
VARS2-211ENST00000541562 MYOZ2Q9NPC6 264 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 DDX20Q9UHI6 824 aaKnown RBP16.1■□□□□ 0.17
VARS2-211ENST00000541562 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 TBX20Q9UMR3 447 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 SPAG7O75391 227 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 GH1P01241 217 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 SCP2P22307 547 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 SMTNP53814 917 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 LRRC71Q8N4P6 559 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 NT5C1BQ96P26 610 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 POC1B-GALNT4F8VUJ3 575 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 NR3C2P08235 984 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 KRT17Q04695 432 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 TRAPPC12Q8WVT3 735 aa16.1■□□□□ 0.17
VARS2-211ENST00000541562 WDR91A4D1P6 747 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 GMNCA6NCL1 334 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 WEE2P0C1S8 567 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 PIK3CAP42336 1068 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 SUPT20HQ8NEM7 779 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 PSMD1Q99460 953 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 POLR3FQ9H1D9 316 aaPredicted RBP16.09■□□□□ 0.17
VARS2-211ENST00000541562 C12orf65Q9H3J6 166 aaKnown RBP16.09■□□□□ 0.17
VARS2-211ENST00000541562 ALG13Q9NP73 1137 aaKnown RBP16.09■□□□□ 0.17
VARS2-211ENST00000541562 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
VARS2-211ENST00000541562 H0YGN5 161 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 ICAM1P05362 532 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 KRT19P08727 400 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 KCNT1Q5JUK3 1230 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 C10orf76Q5T2E6 689 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 MOXD1Q6UVY6 613 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 KDM7AQ6ZMT4 941 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 ZSWIM1Q9BR11 485 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 PDCD2LQ9BRP1 358 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 STK32BQ9NY57 414 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 NFS1Q9Y697 457 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 PTPRJQ12913 1337 aa16.09■□□□□ 0.17
VARS2-211ENST00000541562 RREB1Q92766 1687 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.173e-6■■■□□ 15.5
VARS2-211ENST00000541562 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.17
VARS2-211ENST00000541562 ADCY2Q08462 1091 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 BMT2Q1RMZ1 405 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 MICALL2Q8IY33 904 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 THNSL1Q8IYQ7 743 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 KIF2BQ8N4N8 673 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 TCP11Q8WWU5 503 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 DEFB129Q9H1M3 183 aa16.08■□□□□ 0.17
VARS2-211ENST00000541562 A0A087WUV0 522 aaPredicted RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 CALCOCO2Q13137 446 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 CUL1Q13616 776 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 SLC39A4Q6P5W5 647 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 GLIS1Q8NBF1 620 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 NEK9Q8TD19 979 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 PARD3BQ8TEW8 1205 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 HMGB1P1B2RPK0 211 aaPredicted RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 RALAP11233 206 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 HNRNPH1P31943 449 aaKnown RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 TMEM63BQ5T3F8 832 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 LRRC34Q8IZ02 419 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 KLF6Q99612 283 aaPredicted RBP16.08■□□□□ 0.16
VARS2-211ENST00000541562 DMAC2Q9NW81 257 aa16.08■□□□□ 0.16
VARS2-211ENST00000541562 STK38LQ9Y2H1 464 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms