RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 WDR18Q9BV38 432 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 PCIF1Q9H4Z3 704 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 MIF4GDA9UHW6 222 aaKnown RBP11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 TISP43B9A030 160 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 GSTA1P08263 222 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 RARAP10276 462 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 ALAS1P13196 640 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 RARGP13631 454 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 CREB1P16220 341 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 COILP38432 576 aaPredicted RBP11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 HADHBP55084 474 aaKnown RBP11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 UBXN2AP68543 259 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 GPC5P78333 572 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 RASA3Q14644 834 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 PPP2R5AQ15172 486 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 CLUL1Q15846 466 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 LONRF1Q17RB8 773 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 TNFAIP8L3Q5GJ75 292 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 ODR4Q5SWX8 454 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 SEL1L2Q5TEA6 688 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 ART4Q93070 314 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 PCDHB18PQ96TA0 734 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 TMEM109Q9BVC6 243 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 ACP6Q9NPH0 428 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
PHACTR3-209ENST00000541461 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 UBOX5O94941 541 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 GDF11O95390 407 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 HSPA6P17066 643 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 EPHX2P34913 555 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 TLDC1Q6P9B6 456 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 KIRREL3Q8IZU9 778 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 KAT5Q92993 513 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 MLXIPLQ9NP71 852 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 PCNTO95613 3336 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SNX3O60493 162 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 ENTPD3O75355 529 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SGPL1O95470 568 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 ACSL3O95573 720 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 BCRP11274 1271 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 KCNJ2P63252 427 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 ICA1Q05084 483 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 LRCH2Q5VUJ6 765 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 MAEAQ7L5Y9 396 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 SLC13A5Q86YT5 568 aaPredicted RBP11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 STAMBPL1Q96FJ0 436 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 ATP6V0A4Q9HBG4 840 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 TUFT1Q9NNX1 390 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 L3MBTL1Q9Y468 752 aa11.3□□□□□ -0.6
PHACTR3-209ENST00000541461 IQCA1LA6NCM1 817 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 TCP11X1B4DZS4 312 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 PSMD10O75832 226 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 NDUFB10O96000 172 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 CYP3A4P08684 503 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 CHRNB2P17787 502 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 GCLMP48507 274 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 ZNF131P52739 623 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 SIX1Q15475 284 aaPredicted RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 FKBP1CQ5VVH2 108 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 FAM151AQ8WW52 585 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 CD101Q93033 1021 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 MIEF2Q96C03 454 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 RPS6KC1Q96S38 1066 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 NSRP1Q9H0G5 558 aaKnown RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 PI4KBQ9UBF8 816 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 PFASO15067 1338 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 SPOPO43791 374 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 RTN2O75298 545 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 GBP1P32455 592 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 JAG1P78504 1218 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 SNX1Q13596 522 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 CROCCP2Q86T23 111 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 NOP9Q86U38 636 aaKnown RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 CDC42EP4Q9H3Q1 356 aaKnown RBP11.29□□□□□ -0.6
PHACTR3-209ENST00000541461 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms