RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 MRPL10Q7Z7H8 261 aaKnown RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 RALGPS2Q86X27 583 aaPredicted RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 PIBF1Q8WXW3 757 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 SLC39A7Q92504 469 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 PLA2G2FQ9BZM2 168 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 PCDHA10Q9Y5I2 948 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 A0A0D9SFI3 127 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 MEIS3P2A8K0S8 358 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 B4GALT3O60512 393 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 EFEMP2O95967 443 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 CCNE2O96020 404 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 LRG1P02750 347 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 NTRK1P04629 796 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 RHOP08100 348 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 ITGA4P13612 1032 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 DPP6P42658 865 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 NCBP1Q09161 790 aaKnown RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 ITGB3BPQ13352 177 aaPredicted RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 PTPAQ15257 358 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 PSMD5Q16401 504 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 HDDC3Q8N4P3 179 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 SMARCD2Q92925 531 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 EXOC4Q96A65 974 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 ZNF668Q96K58 619 aaPredicted RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 JPH2Q9BR39 696 aaPredicted RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 TTPALQ9BTX7 342 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 NUSAP1Q9BXS6 441 aaKnown RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 AGPAT5Q9NUQ2 364 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 DNMT3BQ9UBC3 853 aaKnown RBP10.63□□□□□ -0.71
YBX3-211ENST00000541351 SAMM50Q9Y512 469 aa10.63□□□□□ -0.71
YBX3-211ENST00000541351 ACACAQ13085 2346 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 UPK3BL1B0FP48 263 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 UPK3BL2E5RIL1 263 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 MEIS1O00470 390 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 ARHGAP6O43182 974 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 ZNF862O60290 1169 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 OATP04181 439 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 RPL17P18621 184 aaKnown RBP10.62□□□□□ -0.71
YBX3-211ENST00000541351 DSC1Q08554 894 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 SPIRE1Q08AE8 756 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 SEC23AQ15436 765 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 CYP4A22Q5TCH4 519 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 ELMOD1Q8N336 334 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 FAM227BQ96M60 508 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 ASB16Q96NS5 453 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 GLT8D2Q9H1C3 349 aa10.62□□□□□ -0.71
YBX3-211ENST00000541351 SPTA1P02549 2419 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 A0A087WZ62 844 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 IPO5O00410 1097 aaKnown RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 IFIT3O14879 490 aaKnown RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 CHADO15335 359 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 CAPNS1P04632 268 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 ATP4AP20648 1035 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 GBP1P32455 592 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 ELF1P32519 619 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 ATXN3P54252 364 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 SETQ01105 290 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 PCBP1Q15365 356 aaKnown RBP eCLIP10.61□□□□□ -0.71
YBX3-211ENST00000541351 LARP1BQ659C4 914 aaKnown RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 Q6ZS52 159 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 PDZD4Q76G19 769 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 ZNF589Q86UQ0 364 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 EXOC8Q8IYI6 725 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 LEMD2Q8NC56 503 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 FDXACB1Q9BRP7 624 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 DUSP15Q9H1R2 295 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 CLMPQ9H6B4 373 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 RBM12Q9NTZ6 932 aaKnown RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 HCFC1R1Q9NWW0 138 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 GABBR1Q9UBS5 961 aa10.61□□□□□ -0.71
YBX3-211ENST00000541351 EVLQ9UI08 416 aaPredicted RBP10.61□□□□□ -0.71
YBX3-211ENST00000541351 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
YBX3-211ENST00000541351 AKAP13Q12802 2813 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 WDFY3Q8IZQ1 3526 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 MYBPHLA2RUH7 354 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 ARL5CA6NH57 179 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 CDX4O14627 284 aaPredicted RBP10.6□□□□□ -0.71
YBX3-211ENST00000541351 ATXN7O15265 892 aaPredicted RBP10.6□□□□□ -0.71
YBX3-211ENST00000541351 CEBPBP17676 345 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 AMPD2Q01433 879 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 CCINQ13939 588 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 RAB33AQ14088 237 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 UBE2SQ16763 222 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 FAM78AQ5JUQ0 283 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 IQCEQ6IPM2 695 aa10.6□□□□□ -0.71
YBX3-211ENST00000541351 RAB44Q7Z6P3 723 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms