RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ME1P48163 572 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 KRT85P78386 507 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 GTF2BQ00403 316 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
LTBR-208ENST00000541005 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 RESP18Q5W5W9 173 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 ADGRD2Q7Z7M1 963 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 FAM178BQ8IXR5 827 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 EFHBQ8N7U6 833 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 HVCN1Q96D96 273 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 VN1R3Q9BXE9 311 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 ZBP1Q9H171 429 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 MAGEF1Q9HAY2 307 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 KBTBD4Q9NVX7 518 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 KLK14Q9P0G3 267 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 TBX20Q9UMR3 447 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 IRAK3Q9Y616 596 aa14.37□□□□□ -0.11
LTBR-208ENST00000541005 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
LTBR-208ENST00000541005 NRP1O14786 923 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 PPP1R37O75864 691 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 CSPG5O95196 566 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 CTSAP10619 480 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 LTBRP36941 435 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 MCL1Q07820 350 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 TUSC3Q13454 348 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 SMC1AQ14683 1233 aaKnown RBP14.36□□□□□ -0.11
LTBR-208ENST00000541005 NAB2Q15742 525 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 DUSP6Q16828 381 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 SFR1Q86XK3 245 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 MAP4K3Q8IVH8 894 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 RNF168Q8IYW5 571 aaPredicted RBP14.36□□□□□ -0.11
LTBR-208ENST00000541005 PDILTQ8N807 584 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 IQUBQ8NA54 791 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 LEO1Q8WVC0 666 aaPredicted RBP14.36□□□□□ -0.11
LTBR-208ENST00000541005 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
LTBR-208ENST00000541005 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 C2orf16Q68DN1 1984 aa14.36□□□□□ -0.11
LTBR-208ENST00000541005 C2orf71A6NGG8 1288 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 HIDE1A8MVS5 230 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 TBX10O75333 385 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 NR1I2O75469 434 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 THP07101 528 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 BMP1P13497 986 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 KCNA5P22460 613 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 GTF2F1P35269 517 aaKnown RBP eCLIP14.35□□□□□ -0.11
LTBR-208ENST00000541005 NRIP1P48552 1158 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 ADAM15Q13444 863 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 KCNC3Q14003 757 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 BMS1Q14692 1282 aaKnown RBP14.35□□□□□ -0.11
LTBR-208ENST00000541005 PLPP4Q5VZY2 271 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 VPS52Q8N1B4 723 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 CEP120Q8N960 986 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 MRPL43Q8N983 215 aaKnown RBP14.35□□□□□ -0.11
LTBR-208ENST00000541005 MICAL1Q8TDZ2 1067 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 SNX27Q96L92 541 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
LTBR-208ENST00000541005 PYM1Q9BRP8 204 aaKnown RBP14.35□□□□□ -0.11
LTBR-208ENST00000541005 STRA6Q9BX79 667 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 PANK2Q9BZ23 570 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 LRRC27Q9C0I9 530 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 ZHX3Q9H4I2 956 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 TLE6Q9H808 572 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 TOPORSQ9NS56 1045 aaPredicted RBP14.35□□□□□ -0.11
LTBR-208ENST00000541005 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 FAM13BQ9NYF5 915 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 ANKFY1Q9P2R3 1169 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 GDAQ9Y2T3 454 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 DENND4AQ7Z401 1863 aa14.35□□□□□ -0.11
LTBR-208ENST00000541005 VCANP13611 3396 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 HNRNPDLO14979 420 aaKnown RBP14.34□□□□□ -0.11
LTBR-208ENST00000541005 CLDN3O15551 220 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 FAM189A1O60320 539 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 GLP2RO95838 553 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 NMT1P30419 496 aaKnown RBP14.34□□□□□ -0.11
LTBR-208ENST00000541005 OR1G1P47890 313 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 LIG4P49917 911 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 KCNQ1P51787 676 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
LTBR-208ENST00000541005 TMEM184AQ6ZMB5 413 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 ZNF720Q7Z2F6 126 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 TMC7Q7Z402 723 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 ZBTB33Q86T24 672 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 DHX58Q96C10 678 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 BICD1Q96G01 975 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 ZBTB45Q96K62 511 aaPredicted RBP14.34□□□□□ -0.11
LTBR-208ENST00000541005 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 ACAP3Q96P50 834 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 TCHPQ9BT92 498 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 HERC2P3Q9BVR0 1158 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
LTBR-208ENST00000541005 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms