RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 VAMP7P51809 220 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ABCB5Q2M3G0 1257 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 MIGA2Q7L4E1 593 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 MKL1Q969V6 931 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 CENPTQ96BT3 561 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF577Q9BSK1 485 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 PCYOX1Q9UHG3 505 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ARHGEF35A5YM69 484 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 C21orf2O43822 256 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ECEL1O95672 775 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 GHRP10912 638 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 FOXN2P32314 431 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 CALCOCO2Q13137 446 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 DGKZQ13574 1117 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 PASD1Q8IV76 773 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 GLIS1Q8NBF1 620 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 CPA5Q8WXQ8 436 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 CD101Q93033 1021 aa11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ACSF2Q96CM8 615 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 C12orf65Q9H3J6 166 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 RARGP13631 454 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 GAP43P17677 238 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 PADI6Q6TGC4 694 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 RHOT2Q8IXI1 618 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 GLIS2Q9BZE0 524 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANAPC7Q9UJX3 599 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 EIF3DO15371 548 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 BANF1O75531 89 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ALAS1P13196 640 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ADRA2BP18089 450 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 PEX19P40855 299 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 PRELPP51888 382 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 SPP2Q13103 211 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ITIH4Q14624 930 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 PPP2R5AQ15172 486 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 PLA2G4FQ68DD2 849 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 HOMER2Q9NSB8 354 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 HSPBP1Q9NZL4 362 aa11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 NKX1-2Q9UD57 310 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-207ENST00000540998 KDM4FA0A1W2PPD8 638 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TBX3O15119 743 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 THAP12O43422 761 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 BCRP11274 1271 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 KRT5P13647 590 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 RRM1P23921 792 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 SSR1P43307 286 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 MXI1P50539 228 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 FASTKD3Q14CZ7 662 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TMED2Q15363 201 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TMEM63BQ5T3F8 832 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 CCDC50Q8IVM0 306 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TAS1R2Q8TE23 839 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 WDR11Q9BZH6 1224 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 PI4K2BG5E9Z4 385 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 BBOX1O75936 387 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 OAS1P00973 400 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ETS1P14921 441 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 CIITAP33076 1130 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ADCY8P40145 1251 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 PDE6CP51160 858 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 PEX3P56589 373 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 DNAJC3Q13217 504 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 RASA3Q14644 834 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 C11orf63Q6NUN7 778 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 SPATA21Q7Z572 469 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 ECHDC2Q86YB7 292 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 HAUS1Q96CS2 278 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 CLRN2A0PK11 232 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 H0Y3Z8 333 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 IPO5O00410 1097 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 RTN2O75298 545 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TCF4P15884 667 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 CD58P19256 250 aa11.08□□□□□ -0.64
CDC42SE1-207ENST00000540998 TARSP26639 723 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms