RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 MBTPS2O43462 519 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 PPP6R2O75170 966 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 YEATS4O95619 227 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 PLA2G5P39877 138 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 GRM5P41594 1212 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 SMTNP53814 917 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 SMAD4Q13485 552 aaKnown RBP15.59■□□□□ 0.09
USP28-209ENST00000540925 PTPN14Q15678 1187 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 SMAD2Q15796 467 aaKnown RBP15.59■□□□□ 0.09
USP28-209ENST00000540925 ALKAL1Q6UXT8 129 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 CEP120Q8N960 986 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 CD207Q9UJ71 328 aa15.59■□□□□ 0.09
USP28-209ENST00000540925 BARX2Q9UMQ3 279 aaPredicted RBP15.59■□□□□ 0.09
USP28-209ENST00000540925 TRIOO75962 3097 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 SPTLC2O15270 562 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 CLASP2O75122 1294 aaKnown RBP15.58■□□□□ 0.08
USP28-209ENST00000540925 SOD2P04179 222 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 MCF2P10911 925 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 SCP2P22307 547 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 NDUFV1P49821 464 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 TUSC3Q13454 348 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
USP28-209ENST00000540925 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 ZPBP2Q6X784 338 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 HAUS6Q7Z4H7 955 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 AUTS2Q8WXX7 1259 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 DNAJC19Q96DA6 116 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 PPP1R10Q96QC0 940 aaKnown RBP15.58■□□□□ 0.08
USP28-209ENST00000540925 PAAF1Q9BRP4 392 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 HERC2P3Q9BVR0 1158 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 HAPLN2Q9GZV7 340 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 PARVGQ9HBI0 331 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 CD320Q9NPF0 282 aa15.58■□□□□ 0.08
USP28-209ENST00000540925 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.08
USP28-209ENST00000540925 PRG3Q9Y2Y8 225 aaPredicted RBP15.58■□□□□ 0.08
USP28-209ENST00000540925 H0YCG3 227 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 TOM1L1O75674 476 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 CXCL14O95715 111 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 PIGRP01833 764 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 OR1G1P47890 313 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 DHX8Q14562 1220 aaKnown RBP15.57■□□□□ 0.08
USP28-209ENST00000540925 STK38Q15208 465 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 TMEM132AQ24JP5 1023 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 ZNF568Q3ZCX4 644 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 KIAA0319Q5VV43 1072 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 SYCE2Q6PIF2 218 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 EP400NLQ6ZTU2 488 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 TAS1R1Q7RTX1 841 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 APBB1IPQ7Z5R6 666 aaPredicted RBP15.57■□□□□ 0.08
USP28-209ENST00000540925 RASSF8Q8NHQ8 419 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 SLC22A17Q8WUG5 538 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 SUSD6Q92537 303 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 ZBTB45Q96K62 511 aaPredicted RBP15.57■□□□□ 0.08
USP28-209ENST00000540925 ZNF396Q96N95 335 aaPredicted RBP15.57■□□□□ 0.08
USP28-209ENST00000540925 RPS6KC1Q96S38 1066 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 STRA6Q9BX79 667 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 S1PR5Q9H228 398 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 CHST7Q9NS84 486 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 CACNG4Q9UBN1 327 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 PRKAG3Q9UGI9 489 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 GDAQ9Y2T3 454 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 ZDHHC9Q9Y397 364 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 HCFC2Q9Y5Z7 792 aa15.57■□□□□ 0.08
USP28-209ENST00000540925 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.56■□□□□ 0.08
USP28-209ENST00000540925 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 MYMKA6NI61 221 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 FAM189A1O60320 539 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 THP07101 528 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 HSP90AA1P07900 732 aaKnown RBP15.56■□□□□ 0.08
USP28-209ENST00000540925 GTF2BQ00403 316 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 ZP2Q05996 745 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 MCL1Q07820 350 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 CLUL1Q15846 466 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 E2F4Q16254 413 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 ATL3Q6DD88 541 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 ANKRD54Q6NXT1 300 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 CCDC73Q6ZRK6 1079 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 GPR65Q8IYL9 337 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 MYCT1Q8N699 235 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 COLEC11Q9BWP8 271 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 GPR62Q9BZJ7 368 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 ADAM28Q9UKQ2 775 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 TBX20Q9UMR3 447 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 TRIP11Q15643 1979 aa15.56■□□□□ 0.08
USP28-209ENST00000540925 SMIM28A0A1B0GU29 152 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 TRAK2O60296 914 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 PPP1R37O75864 691 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 FAM13AO94988 1023 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 KCNE1P15382 129 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 TXLNAP40222 546 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 DSG1Q02413 1049 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 STRN3Q13033 797 aa15.55■□□□□ 0.08
USP28-209ENST00000540925 HSP90AA2PQ14568 343 aaPredicted RBP15.55■□□□□ 0.08
USP28-209ENST00000540925 BMS1Q14692 1282 aaKnown RBP15.55■□□□□ 0.08
USP28-209ENST00000540925 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
USP28-209ENST00000540925 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms