RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 CES2O00748 559 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 T-ENOLP0DO92 83 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 ITGA4P13612 1032 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 MTIF2P46199 727 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 RPS6KA1Q15418 735 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 ZCWPW2Q504Y3 356 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 GRAMD4Q6IC98 578 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 TTI2Q6NXR4 508 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 CYB5R4Q7L1T6 521 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 TAOK1Q7L7X3 1001 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 DAAM2Q86T65 1068 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 ACTRT1Q8TDG2 376 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 EPS8L3Q8TE67 593 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 SRPK1Q96SB4 655 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 MLXIPLQ9NP71 852 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 MYOZ2Q9NPC6 264 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 FAM207AQ9NSI2 230 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
CTNNA1-243ENST00000540387 KRIT1O00522 736 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 WNT10BO00744 389 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 NDUFB5O43674 189 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TBX10O75333 385 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 KRT38O76015 456 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 DDNO94850 711 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 MARK3P27448 753 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 SLC29A2Q14542 456 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TNFAIP8L3Q5GJ75 292 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 THOC7Q6I9Y2 204 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF449Q6P9G9 518 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 ST13P4Q8IZP2 240 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CSGALNACT2Q8N6G5 542 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 FAM133AQ8N9E0 248 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 UHMK1Q8TAS1 419 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 DIS3LQ8TF46 1054 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CKAP2Q8WWK9 683 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 WASF1Q92558 559 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CNOT6LQ96LI5 555 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 DUSP9Q99956 384 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 DBR1Q9UK59 544 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CROTQ9UKG9 612 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF148Q9UQR1 794 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TDRKHQ9Y2W6 561 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 UTP11Q9Y3A2 253 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 NOC2LQ9Y3T9 749 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 STK24Q9Y6E0 443 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF646O15015 1829 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CCDC188H7C350 402 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 PGRMC1O00264 195 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 NKRFO15226 690 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 EYA4O95677 639 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 ALDH2P05091 517 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 SLURP2P0DP57 97 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 PORP16435 677 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 EMP3P54852 163 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 UBAP2Q5T6F2 1119 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 SLC44A5Q8NCS7 719 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TRIM51Q9BSJ1 452 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 IDI2Q9BXS1 227 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 STMN4Q9H169 189 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CUEDC2Q9H467 287 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 SLITRK6Q9H5Y7 841 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CLIC5Q9NZA1 410 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 AIPL1Q9NZN9 384 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 BTBD7Q9P203 1132 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 CHKBQ9Y259 395 aa10.11□□□□□ -0.79
CTNNA1-243ENST00000540387 TMEM120BA0PK00 339 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 RBAK-RBAKDNI3L0D1 243 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 IPO5O00410 1097 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 FGRP09769 529 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CDK4P11802 303 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TXKP42681 527 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 POLGP54098 1239 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF280AP59817 542 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 AUHQ13825 339 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 CYLC2Q14093 348 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TBC1D10BQ4KMP7 808 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 C16orf87Q6PH81 154 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZSCAN29Q8IWY8 852 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 GPC2Q8N158 579 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 GDAP1Q8TB36 358 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 DTX3LQ8TDB6 740 aa10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 TGS1Q96RS0 853 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-243ENST00000540387 ZNF70Q9UC06 446 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms