RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 MMRN2Q9H8L6 949 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 C1orf112Q9NSG2 853 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 SLC38A7Q9NVC3 462 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 ADGRA3Q8IWK6 1321 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 DOCK5Q9H7D0 1870 aa12.78□□□□□ -0.36
VTN-202ENST00000539746 B4GALT4O60513 344 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 TSPAN1O60635 241 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 EFCAB14O75071 495 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 KIF4AO95239 1232 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 MFAP3P55082 362 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 SOX10P56693 466 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 BPIFB4P59827 614 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 CLDN10P78369 228 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 KCNA1Q09470 495 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 TRPC3Q13507 836 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 SYCP1Q15431 976 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
VTN-202ENST00000539746 TMTC1Q8IUR5 882 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 SPC24Q8NBT2 197 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 PARD3BQ8TEW8 1205 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 CGRRF1Q99675 332 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 TRAIPQ9BWF2 469 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 PCIF1Q9H4Z3 704 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 GCNT4Q9P109 453 aa12.77□□□□□ -0.37
VTN-202ENST00000539746 PIN4Q9Y237 131 aaKnown RBP12.77□□□□□ -0.37
VTN-202ENST00000539746 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 MYADML2A6NDP7 307 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 ARHGAP6O43182 974 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 ZSCAN12O43309 604 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 HOXA2O43364 376 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 OFD1O75665 1012 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CAPN15O75808 1086 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CD4P01730 458 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 HSPA1AP0DMV8 641 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 HSPA1BP0DMV9 641 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 SELPP16109 830 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 ADSSP30520 456 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 ATICP31939 592 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CYLC1P35663 651 aaPredicted RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 PNPLA4P41247 253 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 GJA8P48165 433 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CDK17Q00537 523 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 DRP2Q13474 957 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 BIRC3Q13489 604 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 TWF2Q6IBS0 349 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 APTXQ7Z2E3 356 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CCDC170Q8IYT3 715 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 BORCS6Q96GS4 357 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 NAP1L5Q96NT1 182 aaPredicted RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 NT5C1BQ96P26 610 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 OSMRQ99650 979 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 SENP6Q9GZR1 1112 aaPredicted RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 POLD4Q9HCU8 107 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 PTPRHQ9HD43 1115 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
VTN-202ENST00000539746 USP20Q9Y2K6 914 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 CDY2AQ9Y6F7 541 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 DOCK3Q8IZD9 2030 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
VTN-202ENST00000539746 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 MFAP3LO75121 409 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 GFPT2O94808 682 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 DLATP10515 647 aaKnown RBP12.75□□□□□ -0.37
VTN-202ENST00000539746 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
VTN-202ENST00000539746 PBX1P40424 430 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 TAS1R3Q7RTX0 852 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 CCDC186Q7Z3E2 898 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 ANKRD33Q7Z3H0 272 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 NECAB2Q7Z6G3 386 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 RDH13Q8NBN7 331 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 BEST2Q8NFU1 509 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 CCDC127Q96BQ5 260 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 BAG1Q99933 345 aaPredicted RBP12.75□□□□□ -0.37
VTN-202ENST00000539746 CDT1Q9H211 546 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 PDZD7Q9H5P4 517 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 APEX2Q9UBZ4 518 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 ITGA11Q9UKX5 1188 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 COQ4Q9Y3A0 265 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 SCN10AQ9Y5Y9 1956 aa12.75□□□□□ -0.37
VTN-202ENST00000539746 CLSTN1O94985 981 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 PFKMP08237 780 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 STAG3L1P0CL83 205 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 HARSP12081 509 aaKnown RBP12.74□□□□□ -0.37
VTN-202ENST00000539746 FERP16591 822 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 KRT9P35527 623 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 STAT1P42224 750 aa12.74□□□□□ -0.37
VTN-202ENST00000539746 PIK3CAP42336 1068 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms