RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CHKAP35790 457 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 ACOT2P49753 483 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SWSAP1Q6NVH7 229 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SHC3Q92529 594 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 ZNF516Q92618 1163 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 CTNNAL1Q9UBT7 734 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 ACSL3O95573 720 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 CHN1P15882 459 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 KCNA3P22001 575 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 FSTL1Q12841 308 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SEL1L2Q5TEA6 688 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 KRT39Q6A163 491 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 RUFY4Q6ZNE9 571 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 TAS1R3Q7RTX0 852 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SLC13A5Q86YT5 568 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-210ENST00000539599 SUPT20HQ8NEM7 779 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 NEK9Q8TD19 979 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 MGARPQ8TDB4 240 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 DDX1Q92499 740 aaKnown RBP15.09■□□□□ 0.01
UBE3B-210ENST00000539599 BICD1Q96G01 975 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-210ENST00000539599 MYOZ2Q9NPC6 264 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 GGT7Q9UJ14 662 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 GRIN3BO60391 1043 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 RGS20O76081 388 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 PSMC5P62195 406 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 TRAF1Q13077 416 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 LRRC14Q15048 493 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 LONRF1Q17RB8 773 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 EMC10Q5UCC4 262 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 DENND2CQ68D51 928 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 C11orf63Q6NUN7 778 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 ADAM7Q9H2U9 754 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 RAB20Q9NX57 234 aa15.08■□□□□ 0.01
UBE3B-210ENST00000539599 SEPT9Q9UHD8 586 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-210ENST00000539599 R3HDM2Q9Y2K5 976 aaKnown RBP15.08■□□□□ 0.01
UBE3B-210ENST00000539599 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 COL2A1P02458 1487 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 H0YHG0 523 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 HARSP12081 509 aaKnown RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 MUTP22033 750 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 RRM1P23921 792 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 CTNNA2P26232 953 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 COILP38432 576 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 FNTAP49354 379 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 PDE6CP51160 858 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 DMP1Q13316 513 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 NBPF12Q5TAG4 269 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 ANKS1BQ7Z6G8 1248 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 CCDC60Q8IWA6 550 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 TEPSINQ96N21 525 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 OSBPL7Q9BZF2 842 aa15.08■□□□□ 0
UBE3B-210ENST00000539599 PABPC3Q9H361 631 aaKnown RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 CTDP1Q9Y5B0 961 aaPredicted RBP15.08■□□□□ 0
UBE3B-210ENST00000539599 CTNND1O60716 968 aaKnown RBP15.07■□□□□ 0
UBE3B-210ENST00000539599 BIRC3Q13489 604 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 SEPT14Q6ZU15 432 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 B4GALNT4Q76KP1 1039 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 TMEM130Q8N3G9 435 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 TMEM143Q96AN5 459 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 JPH2Q9BR39 696 aaPredicted RBP15.07■□□□□ 0
UBE3B-210ENST00000539599 XPNPEP1Q9NQW7 623 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 RNF146Q9NTX7 359 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 SYNPO2Q9UMS6 1093 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 FER1L6Q2WGJ9 1857 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 WDR64B1ANS9 1081 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 TP73O15350 636 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 HNRNPH1P31943 449 aaKnown RBP15.07■□□□□ 0
UBE3B-210ENST00000539599 MFAP3P55082 362 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 PRKG1Q13976 671 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 MTERF2Q49AM1 385 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 DLK2Q6UY11 383 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 MAP4K3Q8IVH8 894 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 C4orf19Q8IY42 314 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 NIM1KQ8IY84 436 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 KCTD17Q8N5Z5 321 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 EIF1ADQ8N9N8 165 aaKnown RBP15.07■□□□□ 0
UBE3B-210ENST00000539599 FBXL13Q8NEE6 735 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 SEC16BQ96JE7 1060 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 NT5C1BQ96P26 610 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 ATP8B3O60423 1300 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 UMODL1Q5DID0 1318 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 DNM1LO00429 736 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 NLRP11P59045 1033 aaKnown RBP15.07■□□□□ 0
UBE3B-210ENST00000539599 CDR2Q01850 454 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 PPP1R7Q15435 360 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 AGBL2Q5U5Z8 902 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.07■□□□□ 0
UBE3B-210ENST00000539599 TLCD1Q96CP7 247 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 HAPLN2Q9GZV7 340 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 USTQ9Y2C2 406 aa15.07■□□□□ 0
UBE3B-210ENST00000539599 WDR46O15213 610 aaKnown RBP15.06■□□□□ 0
UBE3B-210ENST00000539599 TBC1D12O60347 775 aa15.06■□□□□ 0
UBE3B-210ENST00000539599 PLA2G6O60733 806 aa15.06■□□□□ 0
UBE3B-210ENST00000539599 EDN1P05305 212 aa15.06■□□□□ 0
UBE3B-210ENST00000539599 CHRNA3P32297 505 aa15.06■□□□□ 0
UBE3B-210ENST00000539599 CYP24A1Q07973 514 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms