RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CTSHP09668 335 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 VAMP7P51809 220 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 CYP24A1Q07973 514 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 BFSP2Q13515 415 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
LEMD3-202ENST00000539442 EEF1DP3Q658K8 133 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 SLC39A5Q6ZMH5 540 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
LEMD3-202ENST00000539442 ANKRD33Q7Z3H0 272 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 CBWD2Q8IUF1 395 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 USP38Q8NB14 1042 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 SPOCK2Q92563 424 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
LEMD3-202ENST00000539442 MFSD14AQ96MC6 490 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 FAM213AQ9BRX8 229 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 CDT1Q9H211 546 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 TRIP12Q14669 1992 aaPredicted RBP11.59□□□□□ -0.55
LEMD3-202ENST00000539442 ITIH6Q6UXX5 1313 aa11.59□□□□□ -0.55
LEMD3-202ENST00000539442 GOLGA6L6A8MZA4 724 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 GPR182O15218 404 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 TEX33O43247 280 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 RPS6KA5O75582 802 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 ADRB2P07550 413 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 CKBP12277 381 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 FGFR4P22455 802 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 HOXA11P31270 313 aaPredicted RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 PBX1P40424 430 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 UBXN1Q04323 297 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 PSMD6Q15008 389 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 SURF1Q15526 300 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 FBXO47Q5MNV8 452 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 TCERG1LQ5VWI1 586 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 ZBTB33Q86T24 672 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 FAM228AQ86W67 206 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 VSTM4Q8IW00 320 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 CPB2Q96IY4 423 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 ERGIC2Q96RQ1 377 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 IRX2Q9BZI1 471 aaPredicted RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 C11orf49Q9H6J7 331 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 CHST12Q9NRB3 414 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 RBAKQ9NYW8 714 aaPredicted RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 IMPACTQ9P2X3 320 aa11.58□□□□□ -0.56
LEMD3-202ENST00000539442 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 NOC2LQ9Y3T9 749 aaKnown RBP11.58□□□□□ -0.56
LEMD3-202ENST00000539442 GTPBP10A4D1E9 387 aaKnown RBP11.57□□□□□ -0.56
LEMD3-202ENST00000539442 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 PMM2O15305 246 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 P4HA2O15460 535 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 CLTAP09496 248 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 HARSP12081 509 aaKnown RBP11.57□□□□□ -0.56
LEMD3-202ENST00000539442 GTF2H1P32780 548 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 ACOT2P49753 483 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM14Q14142 442 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 ZNF618Q5T7W0 954 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 SPECC1LQ69YQ0 1117 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 DRC7Q8IY82 874 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 ZSWIM2Q8NEG5 633 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 PARD3BQ8TEW8 1205 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 IQCDQ96DY2 449 aa11.57□□□□□ -0.56
LEMD3-202ENST00000539442 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
LEMD3-202ENST00000539442 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 IL18RAPO95256 599 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 PARNO95453 639 aaKnown RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 SELPP16109 830 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 DEKP35659 375 aaKnown RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 GRM5P41594 1212 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 FMO5P49326 533 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 AP3M2P53677 418 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 CLDN10P78369 228 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 PAK2Q13177 524 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 LPIN1Q14693 890 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 ZBTB41Q5SVQ8 909 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 LRRC8DQ7L1W4 858 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 TMC6Q7Z403 805 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 NECAB2Q7Z6G3 386 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 THNSL1Q8IYQ7 743 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 PLEKHO2Q8TD55 490 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 DIS3LQ8TF46 1054 aaKnown RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 RPF1Q9H9Y2 349 aaKnown RBP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 ERVK-5Q9HDB9 667 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 ST3GAL5Q9UNP4 418 aa11.56□□□□□ -0.56
LEMD3-202ENST00000539442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.56□□□□□ -0.56
LEMD3-202ENST00000539442 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
LEMD3-202ENST00000539442 NPTXRO95502 500 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM49P0CI25 452 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 TRIM49CP0CI26 452 aa11.55□□□□□ -0.56
LEMD3-202ENST00000539442 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms