RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ATF7IP2Q5U623 682 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 KCNK18Q7Z418 384 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 ZBTB33Q86T24 672 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 DAW1Q8N136 415 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 TDRD5Q8NAT2 981 aaKnown RBP24.45■■□□□ 1.5
SCARB1-206ENST00000539320 DRC1Q96MC2 740 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 MFSD14AQ96MC6 490 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 GPR62Q9BZJ7 368 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 MAN1C1Q9NR34 630 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 CACNG4Q9UBN1 327 aa24.45■■□□□ 1.5
SCARB1-206ENST00000539320 DAXXQ9UER7 740 aaPredicted RBP24.45■■□□□ 1.5
SCARB1-206ENST00000539320 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.45■■□□□ 1.5
SCARB1-206ENST00000539320 SF3B1O75533 1304 aaKnown RBP eCLIP24.44■■□□□ 1.5
SCARB1-206ENST00000539320 CASTOR2A6NHX0 329 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 NPTX2P47972 431 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 SIGLEC14Q08ET2 396 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 ZRSR1Q15695 479 aaKnown RBP24.44■■□□□ 1.5
SCARB1-206ENST00000539320 USP41Q3LFD5 358 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 NT5DC1Q5TFE4 455 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 ELMSAN1Q6PJG2 1045 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 APBB1IPQ7Z5R6 666 aaPredicted RBP24.44■■□□□ 1.5
SCARB1-206ENST00000539320 GPR149Q86SP6 731 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 GPR65Q8IYL9 337 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 RABGGTAQ92696 567 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.44■■□□□ 1.5
SCARB1-206ENST00000539320 CHST7Q9NS84 486 aa24.44■■□□□ 1.5
SCARB1-206ENST00000539320 PLXNA3P51805 1871 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 CCDC169A6NNP5 214 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 THP07101 528 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 MAPK7Q13164 816 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 HYIQ5T013 277 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 RINT1Q6NUQ1 792 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 CCDC149Q6ZUS6 474 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 BMP8AQ7Z5Y6 402 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 FEZF2Q8TBJ5 459 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 B3GALT6Q96L58 329 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 PAAF1Q9BRP4 392 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 TNFSF13BQ9Y275 285 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 USTQ9Y2C2 406 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 GDAQ9Y2T3 454 aa24.43■■□□□ 1.5
SCARB1-206ENST00000539320 TRIOO75962 3097 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 VWA3AA6NCI4 1184 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 K7ERI5 159 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 TADA2AO75478 443 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 CREMQ03060 361 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 ARL6IP4Q66PJ3 421 aaKnown RBP24.42■■□□□ 1.5
SCARB1-206ENST00000539320 C15orf39Q6ZRI6 1047 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 C1orf186Q6ZWK4 172 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 CMASQ8NFW8 434 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-206ENST00000539320 RIN2Q8WYP3 895 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-206ENST00000539320 TIPINQ9BVW5 301 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 KMT5AQ9NQR1 393 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 ARHGAP28Q9P2N2 729 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 DPP7Q9UHL4 492 aa24.42■■□□□ 1.5
SCARB1-206ENST00000539320 PIEZO1Q92508 2521 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 KIF4AO95239 1232 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 NAB2Q15742 525 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 ZNF568Q3ZCX4 644 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 ZDHHC14Q8IZN3 488 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 KCTD17Q8N5Z5 321 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 KREMEN2Q8NCW0 462 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 HASPINQ8TF76 798 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 CDK5RAP3Q96JB5 506 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 PNMA5Q96PV4 448 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 MRPL4Q9BYD3 311 aaKnown RBP24.41■■□□□ 1.5
SCARB1-206ENST00000539320 NT5C3AQ9H0P0 336 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 CXCL16Q9H2A7 254 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 TMEM134Q9H6X4 195 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 C17orf75Q9HAS0 396 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 C2orf16Q68DN1 1984 aa24.41■■□□□ 1.5
SCARB1-206ENST00000539320 MYO10Q9HD67 2058 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 GUCY2CP25092 1073 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 LARP1BQ659C4 914 aaKnown RBP24.4■■□□□ 1.5
SCARB1-206ENST00000539320 PBXIP1Q96AQ6 731 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 CDT1Q9H211 546 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 KCNH6Q9H252 994 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 FNIP2Q9P278 1114 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 SORCS3Q9UPU3 1222 aa24.4■■□□□ 1.5
SCARB1-206ENST00000539320 C1RP00736 705 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 MTMR3Q13615 1198 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 TMEM119Q4V9L6 283 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 GLRA4Q5JXX5 417 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 RTP2Q5QGT7 225 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 TAS1R3Q7RTX0 852 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 SUGP1Q8IWZ8 645 aaKnown RBP24.39■■□□□ 1.49
SCARB1-206ENST00000539320 PLCD3Q8N3E9 789 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 ASIC4Q96FT7 647 aa24.39■■□□□ 1.49
SCARB1-206ENST00000539320 ACO2Q99798 780 aaKnown RBP24.39■■□□□ 1.49
SCARB1-206ENST00000539320 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.49
SCARB1-206ENST00000539320 RPL17P18621 184 aaKnown RBP24.38■■□□□ 1.49
SCARB1-206ENST00000539320 GRM5P41594 1212 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 ELAVL2Q12926 359 aaKnown RBP24.38■■□□□ 1.49
SCARB1-206ENST00000539320 GLYCTKQ8IVS8 523 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 CEP120Q8N960 986 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 SYT2Q8N9I0 419 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-206ENST00000539320 HDAC7Q8WUI4 952 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 ACSF2Q96CM8 615 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-206ENST00000539320 PLIN2Q99541 437 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 TTPALQ9BTX7 342 aa24.38■■□□□ 1.49
SCARB1-206ENST00000539320 CCDC94Q9BW85 323 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms