RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 N4BP1O75113 896 aaKnown RBP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 RFPL2O75678 378 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 C1RP00736 705 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 CYP11B2P19099 503 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 TUSC3Q13454 348 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 TDGQ13569 410 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 ZNF174Q15697 407 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 PADI6Q6TGC4 694 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 HDAC7Q8WUI4 952 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 RABGGTAQ92696 567 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 CCDC113Q9H0I3 377 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 KCNK12Q9HB15 430 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 WDR6Q9NNW5 1121 aaKnown RBP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 CACNG4Q9UBN1 327 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 DUSP12Q9UNI6 340 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 TDRD15B5MCY1 1934 aaKnown RBP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 CLUHO75153 1309 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 SF3B1O75533 1304 aaKnown RBP eCLIP13.83□□□□□ -0.2
VAMP1-206ENST00000538970 ARHGEF35A5YM69 484 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 PTGESO14684 152 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 TGM5O43548 720 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 KIF4AO95239 1232 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 EDN1P05305 212 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 PRKCBP05771 671 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 SPATA31D3P0C874 917 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 MYBP10242 640 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 MUTP22033 750 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 NAMPTP43490 491 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 CREMQ03060 361 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 MAPK6Q16659 721 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 RTP2Q5QGT7 225 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 CWF19L1Q69YN2 538 aaKnown RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 ASTLQ6HA08 431 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 LILRA6Q6PI73 481 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 SPATA31D4Q6ZUB0 917 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 PALB2Q86YC2 1186 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 NOSTRINQ8IVI9 506 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 FBXO18Q8NFZ0 1043 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 RIN2Q8WYP3 895 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 STAMQ92783 540 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
VAMP1-206ENST00000538970 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 MFSD1Q9H3U5 465 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 PLEKHA4Q9H4M7 779 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
VAMP1-206ENST00000538970 CASTOR2A6NHX0 329 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 ACKR2O00590 384 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 TADA2AO75478 443 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 RECQL4O94761 1208 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 GBP2P32456 591 aaPredicted RBP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 RBM25P49756 843 aaKnown RBP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 HMGN5P82970 282 aaKnown RBP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 NAB2Q15742 525 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 ECM1Q16610 540 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 GLYCTKQ8IVS8 523 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 HASPINQ8TF76 798 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 ZDHHC7Q9NXF8 308 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 IGSF9Q9P2J2 1179 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 EPS15L1Q9UBC2 864 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
VAMP1-206ENST00000538970 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
VAMP1-206ENST00000538970 FAM186AA6NE01 2351 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 NARSO43776 548 aaKnown RBP13.8□□□□□ -0.2
VAMP1-206ENST00000538970 NPR3P17342 541 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 LIG1P18858 919 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 CLCN5P51795 746 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 NBR1Q14596 966 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 PRSS55Q6UWB4 352 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-206ENST00000538970 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 PIK3R5Q8WYR1 880 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 MYADMQ96S97 322 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 ADPGKQ9BRR6 497 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 PRKD2Q9BZL6 878 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 BHMT2Q9H2M3 363 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 KMT2BQ9UMN6 2715 aaPredicted RBP13.8□□□□□ -0.2
VAMP1-206ENST00000538970 WDR87Q6ZQQ6 2873 aa13.8□□□□□ -0.2
VAMP1-206ENST00000538970 ZMYND10O75800 440 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 THP07101 528 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 AOC1P19801 751 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
VAMP1-206ENST00000538970 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms