RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
CLSTN3-208ENST00000538933 DDX25Q9UHL0 483 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-208ENST00000538933 INPP5FQ9Y2H2 1132 aa13.87□□□□□ -0.19
CLSTN3-208ENST00000538933 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
CLSTN3-208ENST00000538933 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-208ENST00000538933 IGF2RP11717 2491 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 IPO5O00410 1097 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 C2CD2LO14523 706 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 NRP1O14786 923 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 ZNF862O60290 1169 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 TDP2O95551 362 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 YEATS4O95619 227 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 GLUD1P00367 558 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 C1RP00736 705 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 SOD2P04179 222 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 ALDH2P05091 517 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 ADH1AP07327 375 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 CYP3A4P08684 503 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 TDGF1P13385 188 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 TMOD1P28289 359 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 TOB1P50616 345 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 PRKCQQ04759 706 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 DRP2Q13474 957 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 CALCRLQ16602 461 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 PRR16Q569H4 304 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 PPP4R3AQ6IN85 833 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 ZNF746Q6NUN9 644 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 MOXD1Q6UVY6 613 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 AGMOQ6ZNB7 445 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 PRMT8Q9NR22 394 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 FAM105AQ9NUU6 356 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 MARCH5Q9NX47 278 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 DPP7Q9UHL4 492 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 F5P12259 2224 aa13.86□□□□□ -0.19
CLSTN3-208ENST00000538933 SHISA7A6NL88 538 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 SKIP12755 728 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 CD72P21854 359 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 MAGEA9P43362 315 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 NASPP49321 788 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 SPEM2Q0P670 501 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 RSPO2Q6UXX9 243 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 GET4Q7L5D6 327 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 PLA2G4DQ86XP0 818 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 NETO1Q8TDF5 533 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 HERC2P3Q9BVR0 1158 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 PLEKHA4Q9H4M7 779 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 GDPD2Q9HCC8 539 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 GABBR1Q9UBS5 961 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 TCEAL9Q9UHQ7 104 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 PCDHA10Q9Y5I2 948 aa13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 ZFP37Q9Y6Q3 630 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-208ENST00000538933 LAD1O00515 517 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 SPTLC2O15270 562 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 OR52Z1P0C646 297 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 PMLP29590 882 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 CIITAP33076 1130 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 RPS9P46781 194 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 ME1P48163 572 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 PTGDRQ13258 359 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 UBXN2BQ14CS0 331 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 TARBP2Q15633 366 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 MRPL10Q7Z7H8 261 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 ZNF687Q8N1G0 1237 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 FAM126AQ9BYI3 521 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
CLSTN3-208ENST00000538933 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 WNT7AO00755 349 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 TGM5O43548 720 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 LRP3O75074 770 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 URODP06132 367 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 PSAPP07602 524 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 SHC2P98077 582 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 DSG1Q02413 1049 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 Q4G0T1 1027 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 ZBTB41Q5SVQ8 909 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 PALB2Q86YC2 1186 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 SLFN12Q8IYM2 578 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 LEO1Q8WVC0 666 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-208ENST00000538933 FAM167AQ96KS9 214 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms