RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 A0A0U1RQF3 1178 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 SMTNL1A8MU46 457 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 CAPN15O75808 1086 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 LDHAP00338 332 aaKnown RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 RAB27AP51159 221 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 IKBKEQ14164 716 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 C16orf59Q7L2K0 433 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 LBHD1Q9BQE6 289 aaPredicted RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 HSD3B7Q9H2F3 369 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 THAP9Q9H5L6 903 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 SNTG2Q9NY99 539 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 CPSF3Q9UKF6 684 aaKnown RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 ENPP3O14638 875 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 ATF7P17544 494 aaPredicted RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 SLC24A5Q71RS6 500 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 ECHDC2Q86YB7 292 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 IRF2BP1Q8IU81 584 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 FAM186BQ8IYM0 893 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 CCDC94Q9BW85 323 aaPredicted RBP25.59■■□□□ 1.69
TMEM260-202ENST00000538838 RNF39Q9H2S5 420 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 C1orf112Q9NSG2 853 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 TTC3P53804 2025 aa25.59■■□□□ 1.69
TMEM260-202ENST00000538838 MEIS3P2A8K0S8 358 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 SLC16A3O15427 465 aaKnown RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 FGFR1OPO95684 399 aaKnown RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 CXCL8P10145 99 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 EPB41P11171 864 aaKnown RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 AKAP5P24588 427 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 PSMC2P35998 433 aaKnown RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 FILIP1Q7Z7B0 1213 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 RNF169Q8NCN4 708 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 LPPQ93052 612 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 CNOT6LQ96LI5 555 aaKnown RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 RBSNQ9H1K0 784 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 KIAA1586Q9HCI6 787 aa25.58■■□□□ 1.69
TMEM260-202ENST00000538838 RBAKQ9NYW8 714 aaPredicted RBP25.58■■□□□ 1.69
TMEM260-202ENST00000538838 RECQL4O94761 1208 aa25.57■■□□□ 1.68
TMEM260-202ENST00000538838 CLTAP09496 248 aa25.57■■□□□ 1.68
TMEM260-202ENST00000538838 ENOX2Q16206 610 aaKnown RBP25.57■■□□□ 1.68
TMEM260-202ENST00000538838 KYAT1Q16773 422 aa25.57■■□□□ 1.68
TMEM260-202ENST00000538838 CDKAL1Q5VV42 579 aa25.57■■□□□ 1.68
TMEM260-202ENST00000538838 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.57■■□□□ 1.68
TMEM260-202ENST00000538838 FAM43BQ6ZT52 329 aaPredicted RBP25.57■■□□□ 1.68
TMEM260-202ENST00000538838 MKNK1Q9BUB5 465 aa25.57■■□□□ 1.68
TMEM260-202ENST00000538838 ZNF233A6NK53 670 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 MEFVO15553 781 aaPredicted RBP25.56■■□□□ 1.68
TMEM260-202ENST00000538838 ZNF623O75123 536 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 SKIP12755 728 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 WNT7BP56706 349 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 CCDC40Q4G0X9 1142 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 ZNF365Q70YC5 407 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 OTOP2Q7RTS6 562 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 MRPL10Q7Z7H8 261 aaKnown RBP25.56■■□□□ 1.68
TMEM260-202ENST00000538838 ZNF598Q86UK7 904 aaKnown RBP25.56■■□□□ 1.68
TMEM260-202ENST00000538838 BRSK2Q8IWQ3 736 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 ACAP3Q96P50 834 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 PARP2Q9UGN5 583 aa25.56■■□□□ 1.68
TMEM260-202ENST00000538838 ABHD14A-ACY1A0A1B0GW23 586 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 GOLGA6L19H0YKK7 550 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 TULP1O00294 542 aaPredicted RBP25.55■■□□□ 1.68
TMEM260-202ENST00000538838 ACTN1P12814 892 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 ITGA4P13612 1032 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 FAM189BP81408 668 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 CYP24A1Q07973 514 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 HACE1Q8IYU2 909 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.55■■□□□ 1.68
TMEM260-202ENST00000538838 RPF1Q9H9Y2 349 aaKnown RBP25.55■■□□□ 1.68
TMEM260-202ENST00000538838 CEP290O15078 2479 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 ZNF18P17022 549 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 TMEM240Q5SV17 173 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 PSRC1Q6PGN9 363 aaPredicted RBP25.55■■□□□ 1.68
TMEM260-202ENST00000538838 AGMOQ6ZNB7 445 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 CREBRFQ8IUR6 639 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 FAM114A1Q8IWE2 563 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 PLEKHO2Q8TD55 490 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 CXCL16Q9H2A7 254 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 KLK14Q9P0G3 267 aa25.55■■□□□ 1.68
TMEM260-202ENST00000538838 TDRD15B5MCY1 1934 aaKnown RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 MAPK13O15264 365 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 BAIAP3O94812 1187 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 FGBP02675 491 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 MAGEA10P43363 369 aaPredicted RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 YARSP54577 528 aaKnown RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 WDR5P61964 334 aaKnown RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 HSP90AA2PQ14568 343 aaPredicted RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 SLC10A6Q3KNW5 377 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 PGBD4Q96DM1 585 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 FAM212AQ96EL1 285 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 BORCS6Q96GS4 357 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 SNX27Q96L92 541 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 MFSD14AQ96MC6 490 aa25.54■■□□□ 1.68
TMEM260-202ENST00000538838 MAGEC2Q9UBF1 373 aaPredicted RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 ARMCX3Q9UH62 379 aaPredicted RBP25.54■■□□□ 1.68
TMEM260-202ENST00000538838 KCNJ18B7U540 433 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 GNA14O95837 355 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 RGS19P49795 217 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 DEFB103AP81534 67 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 KCNJ12Q14500 433 aa25.53■■□□□ 1.68
TMEM260-202ENST00000538838 PDE11AQ9HCR9 933 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms