RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ADPGKQ9BRR6 497 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 TRAIPQ9BWF2 469 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 C1orf112Q9NSG2 853 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 FAM105AQ9NUU6 356 aa18.77■□□□□ 0.6
CLN6-202ENST00000538696 CEP290O15078 2479 aa18.77■□□□□ 0.59
CLN6-202ENST00000538696 A0A0B4J269 797 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 ENPP3O14638 875 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 CLDN3O15551 220 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 CALUO43852 315 aaPredicted RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 FAM189A1O60320 539 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 ACTN1P12814 892 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 GARTP22102 1010 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 MATR3P43243 847 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLN6-202ENST00000538696 SNRPFP62306 86 aaKnown RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 NR1I3Q14994 352 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 EDRF1Q3B7T1 1238 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 SLFN12LQ6IEE8 588 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 VSTM4Q8IW00 320 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 C12orf56Q8IXR9 622 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 CEP120Q8N960 986 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 SMG8Q8ND04 991 aaKnown RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 GOLGA5Q8TBA6 731 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 POMGNT1Q8WZA1 660 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 TRIM44Q96DX7 344 aaPredicted RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 TCHPQ9BT92 498 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 MSTO1Q9BUK6 570 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 VPS16Q9H269 839 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 PCIF1Q9H4Z3 704 aa18.76■□□□□ 0.59
CLN6-202ENST00000538696 CGNQ9P2M7 1197 aaKnown RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 FNDC1Q4ZHG4 1894 aaPredicted RBP18.76■□□□□ 0.59
CLN6-202ENST00000538696 ABHD14A-ACY1A0A1B0GW23 586 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 LRRC10BA6NIK2 292 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 GOLGA6L6A8MZA4 724 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 TEX33O43247 280 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 BAIAP3O94812 1187 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 FGFR1OPO95684 399 aaKnown RBP18.75■□□□□ 0.59
CLN6-202ENST00000538696 FGBP02675 491 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 NR3C1P04150 777 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 TPM3P06753 285 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
CLN6-202ENST00000538696 RAB27AP51159 221 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 FKBP3Q00688 224 aaKnown RBP18.75■□□□□ 0.59
CLN6-202ENST00000538696 NFIL3Q16649 462 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLN6-202ENST00000538696 OTOP2Q7RTS6 562 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 ECHDC2Q86YB7 292 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 ZSWIM2Q8NEG5 633 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 CEP63Q96MT8 703 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
CLN6-202ENST00000538696 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
CLN6-202ENST00000538696 HSPBP1Q9NZL4 362 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 HES2Q9Y543 173 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 IPPQ9Y573 584 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 PCDHB2Q9Y5E7 798 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 COL4A6Q14031 1691 aa18.75■□□□□ 0.59
CLN6-202ENST00000538696 A0A0U1RQF3 1178 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 MTIF2P46199 727 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 CYP2J2P51589 502 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 WDR5P61964 334 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 FAM189BP81408 668 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 MLLT1Q03111 559 aaPredicted RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 FILIP1LQ4L180 1135 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 SEZ6Q53EL9 994 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 SLC24A5Q71RS6 500 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 CCDC186Q7Z3E2 898 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 APBB1IPQ7Z5R6 666 aaPredicted RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 ZNF598Q86UK7 904 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 THNSL1Q8IYQ7 743 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 SAAL1Q96ER3 474 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 TRIM6Q9C030 488 aaPredicted RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 DMAC2Q9NW81 257 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 AGO2Q9UKV8 859 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 TDRD15B5MCY1 1934 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 GBF1Q92538 1859 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 GOLGA8IPA6NC78 632 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 GOLGA8JA6NMD2 632 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 LGALS16A8MUM7 142 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 OGTO15294 1046 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 EFCAB14O75071 495 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 ZNF623O75123 536 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 IBSPP21815 317 aaPredicted RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 GRM5P41594 1212 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 DEFB103AP81534 67 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 HS1BP3Q53T59 392 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 MRPL10Q7Z7H8 261 aaKnown RBP18.74■□□□□ 0.59
CLN6-202ENST00000538696 SLC9A9Q8IVB4 645 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 TMEM192Q8IY95 271 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 TMEM174Q8WUU8 243 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 HERVK_113Q902F9 699 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 GDF15Q99988 308 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 APOL6Q9BWW8 343 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 SNTG2Q9NY99 539 aa18.74■□□□□ 0.59
CLN6-202ENST00000538696 TNRC18O15417 2968 aaPredicted RBP18.73■□□□□ 0.59
CLN6-202ENST00000538696 MEIS3P2A8K0S8 358 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 ZBBXA8MT70 800 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 KIAA0391O15091 583 aaKnown RBP18.73■□□□□ 0.59
CLN6-202ENST00000538696 SKIP12755 728 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 NR2F2P24468 414 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms