RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 KLK14Q9P0G3 267 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 CGNQ9P2M7 1197 aaKnown RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 MLH1P40692 756 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 TNFSF9P41273 254 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 ACOT2P49753 483 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 KYAT1Q16773 422 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 COBLL1Q53SF7 1204 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 CLLU1OSQ5K130 101 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 GAD1Q99259 594 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 RAD9AQ99638 391 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 TSG101Q99816 390 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 FAM213AQ9BRX8 229 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
MRPS35-203ENST00000538315 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 GIT1Q9Y2X7 761 aa12.31□□□□□ -0.44
MRPS35-203ENST00000538315 KIAA0391O15091 583 aaKnown RBP12.3□□□□□ -0.44
MRPS35-203ENST00000538315 CLTAP09496 248 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 NLRP12P59046 1061 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 BTG3Q14201 252 aaPredicted RBP12.3□□□□□ -0.44
MRPS35-203ENST00000538315 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 RPF1Q9H9Y2 349 aaKnown RBP12.3□□□□□ -0.44
MRPS35-203ENST00000538315 RNF19AQ9NV58 838 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 CTNND2Q9UQB3 1225 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
MRPS35-203ENST00000538315 ANK1P16157 1881 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 ARL5CA6NH57 179 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 FAM189A1O60320 539 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 EXOC3O60645 756 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 OFD1O75665 1012 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 NR3C1P04150 777 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 CXCL8P10145 99 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 MYOGP15173 224 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 RNASELQ05823 741 aaKnown RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 SPOUT1Q5T280 376 aaKnown RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 ZSWIM2Q8NEG5 633 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 NELFBQ8WX92 580 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 P2RX5Q93086 422 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 ZNF689Q96CS4 500 aaPredicted RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 DHTKD1Q96HY7 919 aaPredicted RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 CASD1Q96PB1 797 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 PBX4Q9BYU1 374 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 CPSF3Q9UKF6 684 aaKnown RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 PDCD11Q14690 1871 aaKnown RBP12.29□□□□□ -0.44
MRPS35-203ENST00000538315 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
MRPS35-203ENST00000538315 TRIM49BA6NDI0 452 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 EXTL3O43909 919 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 POMCP01189 267 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 NR2F2P24468 414 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 CCNE1P24864 410 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 PBX2P40425 430 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 SCNN1GP51170 649 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 AFF1P51825 1210 aaKnown RBP12.28□□□□□ -0.44
MRPS35-203ENST00000538315 STX17P56962 302 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 PPP2R3AQ06190 1150 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 PAK1Q13153 545 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 RAB30Q15771 203 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 DPCR1Q3MIW9 517 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 CEP135Q66GS9 1140 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 CENPPQ6IPU0 288 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
MRPS35-203ENST00000538315 LRRC43Q8N309 656 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 FIBCD1Q8N539 461 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 SNX27Q96L92 541 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 MRPL9Q9BYD2 267 aaKnown RBP12.28□□□□□ -0.44
MRPS35-203ENST00000538315 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
MRPS35-203ENST00000538315 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 KIAA1671Q9BY89 1806 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 BICDL2A1A5D9 508 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 LCHNA4D1U4 455 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 LETM1O95202 739 aaPredicted RBP12.28□□□□□ -0.44
MRPS35-203ENST00000538315 CA3P07451 260 aa12.28□□□□□ -0.44
MRPS35-203ENST00000538315 RPL13P26373 211 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms